| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2057 |
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| Symbol | |
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| ID | 5386160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2370392 |
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| End bp | 2371258 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640865042 |
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| Product | putative spermidine/putrescine ABC transporter, permease protein |
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| Protein accession | YP_001401030 |
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| Protein GI | 153950903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.475072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT GGCGCAACGA TCTGCTTGCC TGGTCGCTGA TGTTGAGTGG CCTGGGCACC
ATTCTGTTAT TGATGGGTTC CACCTTTTAT GTCGTGGTGG TGCAGAGCCT CGGTTACTTC
AACCTTGAAG GGGAAAGCCA TTTTTCGCTG GAGTTCTGGC GTGACATGTT GCAGGACGAG
GTGCTGCATA GCGCCCTATT CTACTCGGTA AAAGTTTCGG TGCTGGGCGC GTTTGGTTCG
GTAATCTTCG CGTATCCGCT GGCGTTATGG CTGCGCAAGC CGCTGATCGC TAAAGAAGGT
ATTATCGCCG TGCTACGCGC ACCGATGTTT ATTCCCGGTA TGGTAGCCGC ATTTTTGTTC
GTCAATATCA TCGCCTACCA CGGTGTGATT AACGAGTTGT TAATGGCACT GGGGGTTATC
AACGAACCGC TGCGAATGCA AAACGATGAC TTCGGTTGGG GCGTTGTTAT TCTGCAAGTC
TGGAAGAACC TGCCGTTTGC CCTGATTCTG GTGGGCGGTG CGGTTAATGC CATCCGCAAC
GATGTGCTGG ACGCCGCCAG CAACCTCGGG GCCAACCGCC TACGGAGCTT TACCGGTATC
GTGGTACCAC TCACATTACC TGCCGTGCAG GTGACGCTCA TTCTGGTCTT TATCGGTGCA
CTCGGCGATT TCGCCTTTTT CTCGGTCGCC GGGCCGCGCA ACACATATTC TCTGGCACGC
CTGATGCAAG CCACCGCGAT GGAATACGGT GAGTGGAATA ACGCTGCCGT GATCGCCGTC
ATTATTATGA CTACCGCGGC TATTTTTACG CTGCTGATTG CCACTTTAAT CACACCGTTC
GCCACCCGTA AAGGAGACGT CAAATGA
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| Protein sequence | MKSWRNDLLA WSLMLSGLGT ILLLMGSTFY VVVVQSLGYF NLEGESHFSL EFWRDMLQDE
VLHSALFYSV KVSVLGAFGS VIFAYPLALW LRKPLIAKEG IIAVLRAPMF IPGMVAAFLF
VNIIAYHGVI NELLMALGVI NEPLRMQNDD FGWGVVILQV WKNLPFALIL VGGAVNAIRN
DVLDAASNLG ANRLRSFTGI VVPLTLPAVQ VTLILVFIGA LGDFAFFSVA GPRNTYSLAR
LMQATAMEYG EWNNAAVIAV IIMTTAAIFT LLIATLITPF ATRKGDVK
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