Gene YpsIP31758_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2020 
SymbolmdtJ 
ID5387512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2324952 
End bp2325395 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content47% 
IMG OID640865004 
Productmultidrug resistance protein MdtJ 
Protein accessionYP_001400993 
Protein GI153948672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.993103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTATT GGATATTTTT AGGTCTGGCA ATTATTGCTG AAATTATTGG CACCCTATCA 
ATGAAATATG CCAGTGTTAG CGGCGAGATG ACCGGGCATA TCGTGATGTA TTTTATGATA 
ACGGGCTCCT ATGTCATGCT CTCGTTAGCG GTTAAGAAAG TAGCATTGGG TGTGGCTTAT 
GCGCTGTGGG AGGGGATCGG CATCCTTATT ATTACTATTT TCAGTGTGAT GTGGTTTGGC 
GAGACGTTAT CGCCACTGAA AATAGCCGGT TTAGTGACAC TGATTGGTGG GATCCTCTTG 
GTGAAATCGG GTACGCGGAA GCCAAAACAA CCGAACCGCC ATCGCGGTAA TCGACCCCCT 
TCGGTACAGG GATTAAAAAC ACAGACTACC GGCCATCATA AGGGTGTTGC TGTTGAGTCA 
GGTGAGCATC ATGCAGCAGC TTGA
 
Protein sequence
MIYWIFLGLA IIAEIIGTLS MKYASVSGEM TGHIVMYFMI TGSYVMLSLA VKKVALGVAY 
ALWEGIGILI ITIFSVMWFG ETLSPLKIAG LVTLIGGILL VKSGTRKPKQ PNRHRGNRPP 
SVQGLKTQTT GHHKGVAVES GEHHAAA