Gene YpsIP31758_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1987 
SymbolgapA 
ID5388383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp2288036 
End bp2289031 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content47% 
IMG OID640864971 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001400960 
Protein GI153947807 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000000000352307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTCCGTGCT 
GCTCAGGAAC GTTCTGACAT CGAAATCGTT GCAATCAACG ATCTGTTGGA CGCTGATTAC 
ATGGCATACA TGCTGAAATA CGACTCTACC CACGGTCGTT TCGACGGTAC TGTAGAAGTA 
AAAGACGGCC ATCTGGTTGT TAACGGTAAA ACCATCCGTG TTACCGCAGA GAGAGATCCG 
GCTAACCTGA AGTGGAACGA AGTTAACGTT GATGTTGTTG CTGAAGCAAC TGGTCTGTTC 
CTGACTGACG AAACCGCACG TAAGCACATC GCTGCTGGCG CTAAGAAAGT TGTTCTGACT 
GGTCCATCTA AAGATGACAC CCCTATGTTC GTTATGGGCG TTAACCACAA AGCTTACGCA 
GGCCAAGAAA TCGTTTCTAA CGCTTCTTGT ACCACTAACT GCCTGGCTCC ACTGGCTAAA 
GTAATCAACG ACAAATTTGG TATCGTTGAA GCGCTGATGA CCACTGTACA TGCGACTACC 
GCAACTCAAA AAACTGTTGA TGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCA 
TCCCAGAATA TCATCCCTTC TTCTACCGGT GCTGCTAAAG CAGTAGGTAA AGTTATTCCA 
GAACTGAATG GTAAACTGAC GGGTATGGCG TTCCGCGTCC CTACTCCTAA CGTTTCTGTT 
GTTGACCTGA CCGCACGTCT GGAAAAACCA GCCTCTTACA AAGAAATCTG TGCTGCGATC 
AAAGCGGCTT CAGAAGGCGA GCTGAAAGGC GTTCTGGGTT ATACCGAAGA TGACGTTGTT 
TCTACCGATT TCAACGGCGA AAAACTGACT TCAGTATTTG ATGCTAAAGC GGGTATCGCG 
CTGAATGACA ACTTTGTGAA ACTGGTTTCT TGGTACGATA ACGAAACTGG CTACTCAAAC 
AAAGTTCTGG ATCTGATCTC TCACATCTCC AAGTAA
 
Protein sequence
MTIKVGINGF GRIGRIVFRA AQERSDIEIV AINDLLDADY MAYMLKYDST HGRFDGTVEV 
KDGHLVVNGK TIRVTAERDP ANLKWNEVNV DVVAEATGLF LTDETARKHI AAGAKKVVLT 
GPSKDDTPMF VMGVNHKAYA GQEIVSNASC TTNCLAPLAK VINDKFGIVE ALMTTVHATT 
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVIP ELNGKLTGMA FRVPTPNVSV 
VDLTARLEKP ASYKEICAAI KAASEGELKG VLGYTEDDVV STDFNGEKLT SVFDAKAGIA 
LNDNFVKLVS WYDNETGYSN KVLDLISHIS K