Gene YpsIP31758_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1763 
Symbol 
ID5388393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2040050 
End bp2040649 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID640864746 
ProductTetR family transcriptional regulator 
Protein accessionYP_001400738 
Protein GI153947956 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00000000000139552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA TACAGCATAC ACATGTAGAC ACCCGAGAAC ATCTACTCGC CACAGGTGAA 
AGGCTCAGTT TACGCCTCGG TTTTAATGGT ATGGGGTTGA GCCTGCTGCT GACTACCGCG 
GGTATCCCAA AAGGCTCGTT TTATCACTAT TTTCGTTCAA AAGAAGTGTT TGGCGAGGCC 
ATGCTCCAAC GCTATTTTGA CCGTTATGAT GCAGAGATGG AAAGCCTGTT AGCCGGTTCA 
CAGGGTGATA AACGCCATCA TCTATTGCAC TATTTTGCTC AATCTATTGC TAACTATTGT 
GGGAGTGAAT GCCACAACGC GTGTCTGGCG GTTAAACTCT CCGCTGAGGT GAGTGATTTA 
TCCGAACCTA TGCGCCATGC GTTGGATATC GGCACTGCTC GAGTGATTGG CCGCTTGCAG 
GATGCCATTG AAGCCGGAAT TGACGAAGGC TCTTTGCGAA CGGTGCTCTC TCCGGCGGCA 
ACCGCAGAAA CGCTCTACGC CTTGTGGCTA GGCGCGTCGC TGCGGGCAAA AGTGAAACAC 
TCTGTCGCCC CACTGACTTG TGCACTGGGA AGCATTGAAC TCATATTACA ACCAGCCTAA
 
Protein sequence
MNKIQHTHVD TREHLLATGE RLSLRLGFNG MGLSLLLTTA GIPKGSFYHY FRSKEVFGEA 
MLQRYFDRYD AEMESLLAGS QGDKRHHLLH YFAQSIANYC GSECHNACLA VKLSAEVSDL 
SEPMRHALDI GTARVIGRLQ DAIEAGIDEG SLRTVLSPAA TAETLYALWL GASLRAKVKH 
SVAPLTCALG SIELILQPA