| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1751 |
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| Symbol | ribE |
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| ID | 5387983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2027545 |
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| End bp | 2028201 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640864734 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001400726 |
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| Protein GI | 153950122 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000000311618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACCG GTATTGTTCA AGGCACCGGG CCTGTGGTGG CCATCGAAGA AAAATCTAAT
TTCCGCACGC ATGTTGTTGA GCTGCCTATG GATATGCTGC CTGAGTTGGC ATTGGGGGCG
TCAGTTGCTC ACAATGGATG CTGCCTCACC GTGACACACA TTGAGGGCAA TCGTGTCAGT
TTTGATTTGA TGAAGGAAAC ATTACGCCTC ACTAACTTAG GGGATATAAA CGTTGGTGAT
AAGGTTAATC TAGAGAGGGC GGCTAAATTC AGCGATGAAA TTGGTGGTCA TCTTATGTCC
GGTCATATTA TCTGTACTGC AGAGATTGCT AAAATATACA CATCAGAAAA TAACCGTCAG
ATTTGGTTTC GTATGCCCAG CGAAGATCTA ATGAAATATG TGTTACATAA AGGTTTTATT
GGTATTGATG GCATCAGCCT GACAATCGGC GAGGTGGTGG GTAATCGTTT CTGTGTTCAT
CTCATTCCAG AAACGTTGTC TCGTACCACA CTGGGTAAAA AGCGGTTAGG GCACCGGGTT
AATATCGAGA TAGATCCGCA GACCCAAGCG GTGGTTGATA CTGTTGAACG GGTATTGGCG
CAGCGCAATA TTGCTAACGC GGCGTTAGTG GACGAAAAAG TCGTGCGGGT GTCATAA
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| Protein sequence | MFTGIVQGTG PVVAIEEKSN FRTHVVELPM DMLPELALGA SVAHNGCCLT VTHIEGNRVS
FDLMKETLRL TNLGDINVGD KVNLERAAKF SDEIGGHLMS GHIICTAEIA KIYTSENNRQ
IWFRMPSEDL MKYVLHKGFI GIDGISLTIG EVVGNRFCVH LIPETLSRTT LGKKRLGHRV
NIEIDPQTQA VVDTVERVLA QRNIANAALV DEKVVRVS
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