| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1706 |
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| Symbol | |
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| ID | 5384741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1977594 |
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| End bp | 1978232 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640864687 |
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| Product | transglycosylase slt family protein |
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| Protein accession | YP_001400683 |
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| Protein GI | 153949070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.190325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTT TATTGTTGGC GGGGTGTGCT AAACAAACCC CACCACCACA AGCGAATAAC
GGGTGGCTGA AAAAAACGCC ACAGGGCAAT TCTCTTAACG TAGCGAAAAG CAGTGCCGGT
TCAACTACCG TTGCTTATAG CGACGTCATT AAACAAGCCG CGAGCCATTA CGGCGTTGAT
GAAACACTGA TTAAAGCGAT TATCCAGGTG GAATCTGGTT ACAACCCGGA TGTTGTGAGT
AGATCCAATG CCGTAGGCTT GATGCAGATT AAAGCCTCTA CCGCCGGGCG TGATGCGTAC
CGGATGAAAG GGCGAAATGG TCAACCGAGC TCTCGTGAGC TAAAAGATCC AGTGAAGAAT
ATTGATATTG GTGCTGCTTA TATCAACATT CTACAAAATC AGCAGTTAGC GGGGATCAAC
GACCCGCAGA CATTACGTTA TGCCACCATC GTTTCTTATG CGAATGGCGC GGGGGCTATG
TTGCGGACTT TTTCATCAGA TAAACGTCTG GCAGTCAATA AAATTAATAG TCTTAGCCCA
AACGAATTTT ATCAGCATAT ACAAAAGAAG CACCCGGCTG CACAGGCTCC ACGTTACTTG
TGGAAGGTGG ATACCGCTTA CCGGGCGATG TCAGAGTAA
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| Protein sequence | MAILLLAGCA KQTPPPQANN GWLKKTPQGN SLNVAKSSAG STTVAYSDVI KQAASHYGVD
ETLIKAIIQV ESGYNPDVVS RSNAVGLMQI KASTAGRDAY RMKGRNGQPS SRELKDPVKN
IDIGAAYINI LQNQQLAGIN DPQTLRYATI VSYANGAGAM LRTFSSDKRL AVNKINSLSP
NEFYQHIQKK HPAAQAPRYL WKVDTAYRAM SE
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