| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1676 |
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| Symbol | |
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| ID | 5385322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1947422 |
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| End bp | 1948159 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640864657 |
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| Product | fimbrial assembly chaperone protein |
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| Protein accession | YP_001400653 |
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| Protein GI | 153948241 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.315033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACTCT TAACGACACT GACACTCTTA ATATTATCGG TTGTGGCGAC TGTGGCTCGT
GCTGAAGTGA TGATCAGTGG GACACGTGTT ATTTATGAAG AGAAACAACG TGAGGGGGTG
GTAAAGGTTT CCAATACGGG CGATATGCCG GTCCTGCTTC AGGCCTGGAT AGATAAAGGT
GATGCGAACG CACGCCCAGA GGCTATCAAG GTGCCGTTTA GTGTAACCCC CCCAGTAGTA
CGTTTAGACC CTAAAAGGGA TCAGACTATT CGTCTTTTTC GCACTGATGG TGGATTAGCG
GCTGATCGTG AAACCCTATT TTGGTTTAAC TTATTAGAAG TCCCGCCAAA GCCAATCCAA
CGTGCGGCTG GTGGTGAGAA CAAAATGCAA TTGGCTTTCC GTACCAGAAT TAAAATGTTT
TACCGCCCTG AAGGATTAAC CGTATTACCT GCGCAAGCGG CCAAGAGTCT CGCATTTTCA
ATGAAAGGCA ATCAGATCGT CATAAAGAAT GCCTCACCGT ATTACATTAC CTTGAGAAAG
CTAGAATTAC GCACGTCAGA GAAAGGGCCT GTATTGGCTA ATTTTACTAA AATCAATAAT
AAAATGGTTG CCCCTTTTAG TGAACTAAGC TTACCTACGA GTGCAAAAGC ATCGATCAAT
AATTCGGCAC AAGTTTTTTA TTCTGTTATT AATGATCAGG GCGGCGAAAC TCAAGGTACG
CAAAAACTGA CCCAATAA
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| Protein sequence | MRLLTTLTLL ILSVVATVAR AEVMISGTRV IYEEKQREGV VKVSNTGDMP VLLQAWIDKG
DANARPEAIK VPFSVTPPVV RLDPKRDQTI RLFRTDGGLA ADRETLFWFN LLEVPPKPIQ
RAAGGENKMQ LAFRTRIKMF YRPEGLTVLP AQAAKSLAFS MKGNQIVIKN ASPYYITLRK
LELRTSEKGP VLANFTKINN KMVAPFSELS LPTSAKASIN NSAQVFYSVI NDQGGETQGT
QKLTQ
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