Gene YpsIP31758_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1670 
Symbol 
ID5385275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1940598 
End bp1941095 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID640864651 
Producthypothetical protein 
Protein accessionYP_001400647 
Protein GI153948057 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000032114 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAGAATTCTA CGCGGAATTA AAACGTGACT TATGTGCCTT AGTTGCAGGT 
GAAACGAATT TTATTGCCAC ACTGGCCAAT GCCAGTGCCT TGCTTTATGA ACGCCTTGAT
GGCTTGAATT GGGCTGGTTT CTACTTGGTC GATGGCAAAC AACTTGTACT CGGGCCTTTT
CAGGGAAAGA TTGCATGTGT GCGTATTCCG GTAGGAAAAG GGGTGTGTGG AACCGCAGTA
GCAGAAAACC GCGTTCAGCG GGTAGGTAAT GTGCATGCTT TCCCCGGTCA TATTGCCTGT
GATGCAGCAA GTAACGCTGA AATTGTGCTG CCAATCACTG TAAAGGGGAA AGTTATCGGC
ATTTTGGATA TTGATAGCAT TGTTTATGAT CGCTTTGATG AAGACGACGA ATTGGGTTTA
ATCTCAGTTG TGGCGGGGCT TTGCGAGCAT CTTGAGTTTT GTGATAGTGC CAAATATGTC
ACAGAGACTG CAAGTTGA
 
Protein sequence
MKKTEFYAEL KRDLCALVAG ETNFIATLAN ASALLYERLD GLNWAGFYLV DGKQLVLGPF 
QGKIACVRIP VGKGVCGTAV AENRVQRVGN VHAFPGHIAC DAASNAEIVL PITVKGKVIG
ILDIDSIVYD RFDEDDELGL ISVVAGLCEH LEFCDSAKYV TETAS