| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1652 |
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| Symbol | alr1 |
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| ID | 5388503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1923462 |
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| End bp | 1924691 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640864633 |
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| Product | alanine racemase |
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| Protein accession | YP_001400629 |
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| Protein GI | 153950742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTTC GTTTTCGTCA TTTATTCTTA TTACCATTAA TAACTTTGGT CGCTTGTAGC
CAACCCGTAT CAAAAAACCA TCTTAGCCTG ACCTCACTAT CTGCCAACGC CCAGCAACCT
GTAGTAAATA ATGCGTGGCT TGAAATCTCT CAAGGTGCGC TGGATTTCAA TACTAAAAAG
ATGCTTACAC TGCTGGATAA TAAATCCACA CTTTGTGCAA TATTAAAAGG TGATGCCTAT
GGACATGACC TGACCTTAGT CACACCGGTG ATGCTAAAAA ACAATGTGCA ATGTATTGGG
GTTGCCAGCA ATCAGGAACT AAAAACGGTA CGTGATCTAG GATTTACGGG TCAGTTGATA
CGGGTCAGAA GTGCAACATT AAAAGAAATG CAACAAGCTA TGGCTTACGA TGTTGAAGAA
CTTATTGGCG ATAAAACCGT CGCTGAGCAG TTAAATAATA TTGCAAAACT GAATGGAAAA
GTTCTGCGTA TCCATCTGGC ACTGAACTCC GCAGGGATGT CTCGTAATGG GCTGGAGGTC
AGTAAGGCCC GCGGTTTAAA TGACGCAAAG ACAATTGCAG GTTTAAAAAA TCTGACAATC
GTTGGCATCA TGTCGCACTA CCCGGTGGAA GATGCTAGCG AAATCAAAGC AGACTTGGCT
CGATTCCAGC AACAAGCCAA AGATGTTATC GCGGTCACGG GGCTAAAACG TGAAAAGATT
AAGCTCCACG TCGCCAATAC ATTCGCGACC TTAGCGGTGC CTGATTCATG GTTGGATATG
GTCCGTGTGG GAGGGGTGTT TTATGGTGAC ACCATCGCCA GCACAGAGTA TAAGCGGGTC
ATGACCTTCA AATCTAACAT CGCATCGCTG AACAACTACC CTAAGGGCGG TACTGTTGGC
TATGACCGGA CCTATACATT GAAACGTGAT TCCCTGCTGG CGAATATCCC CGTGGGTTAT
GCCGATGGGT ATCGCCGAGT ATTTAGTAAT GCGGGGCATG TGATTATTCA AGGTCAGCGC
CTGCCCGTAT TAGGCAAAAC ATCAATGAAT ACGGTCATAG TAGACGTCAC CGATCTGAAA
AAAGTGAGTT TAGGTGATGA AGTTGTCTTG TTCGGTAAGC AAGGCAATGC GGAAATTCAG
GCAGAAGAAA TTGAAGATCT CAGTGGCGCA CTCTTTACCG AAATGTCAAT TCTGTGGGGC
GCAACCAATA AGCGTATTCT GGTAGATTAA
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| Protein sequence | MHVRFRHLFL LPLITLVACS QPVSKNHLSL TSLSANAQQP VVNNAWLEIS QGALDFNTKK
MLTLLDNKST LCAILKGDAY GHDLTLVTPV MLKNNVQCIG VASNQELKTV RDLGFTGQLI
RVRSATLKEM QQAMAYDVEE LIGDKTVAEQ LNNIAKLNGK VLRIHLALNS AGMSRNGLEV
SKARGLNDAK TIAGLKNLTI VGIMSHYPVE DASEIKADLA RFQQQAKDVI AVTGLKREKI
KLHVANTFAT LAVPDSWLDM VRVGGVFYGD TIASTEYKRV MTFKSNIASL NNYPKGGTVG
YDRTYTLKRD SLLANIPVGY ADGYRRVFSN AGHVIIQGQR LPVLGKTSMN TVIVDVTDLK
KVSLGDEVVL FGKQGNAEIQ AEEIEDLSGA LFTEMSILWG ATNKRILVD
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