Gene YpsIP31758_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1496 
Symbol 
ID5385445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1737907 
End bp1739034 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content42% 
IMG OID640864478 
Producthypothetical protein 
Protein accessionYP_001400474 
Protein GI153948076 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000145753 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA ATTGTTTAAA ACATTATCGT GCTGGGCAGC TTTTAGTGTT GGCTATCGGT 
TTGGCGTTTT CTGTACCCAG CGTAGCGCTA ACCGATGTTG CTCAACCTCA GGAACGCTAT
GAAAATTATG TCACACAGCG TCAGACCGTT GATTTACTGA TCAATCAGGC ACAACAAGCC
TTTAAAAATC CCACTCGAAT TTCAGGTGCA GGGTTTACAG GTAAATTACC CTCTAATATG
GAAGTGGTTG CACAGAAGTT ATTACAAGCA CACCAACTCG AGCCATACCG TGTTGATCTC
TTATTTAGTG CAGCAAGCGC ATATATTTAT AATAACAATA TTGAAAAAGC ATTAGCGATT
TATAAAGATA TTTTAAAAGA TGCGCCGGAT GATATTGATG CGCTGATTTA TCTCTCTGCA
TGGTCACGTT TTGCGGGCCA AACATCAGAA AGCCAGAGCT ATTTTGCACA ATTAAAACGG
CTTAATCCGC TGAAAGCACA ACAACTTGAA CAGTTTTATG CCGTTATCGA TAAAGCCGCC
GCTATGCCGA TTTCAGATAC CTTATCAGCA CAACAGTTGG CACAGTTGAA AGCGACCCAA
GGCGAAAATG CGATTGTCAC CTTGGGCTAT GCGTTAAATC CTGATGGTAC GATGAATGAT
GTTCTTATTC AGCGTTTAGA AAAAACGTTA GAAATTGCTC AACAATTGCC AGATGCGTTA
ATTATTGTGA CGGGAGGCGT GCCGCAAAAT AACCAAACCG AAGGTAAATT AATGGCCGAT
TGGTTAATTA AAAAAGGCAT TAAACCTGAA CGTATTTATC AGGATAATTA TGCACGTTCT
ACCGTCGAAA ATGCGTTATA TAGCCGTTAT GCCTTGGCGA AGCATAGAAT TAAAAATGCC
ATCATCATTA GTTCAGGAAG CCATGTTCGC CGTGCCGATG CGTTATTCAC TATTGCAAGT
TGGGAAAGTG GCCCCCACGA TATTAATTTC CTGACCATTG CGGCCTTGGA TAAGCCCTTA
AGTGAATTAC AGAAAACAAG CCCAGCCGAT CTACAGGGTA TTTATCGCGA TGGCCTGAAA
ACACTGGGTT TATGGAGTTT CCGTAGTTAC CCACTTGAGG AGCGTTAA
 
Protein sequence
MKKNCLKHYR AGQLLVLAIG LAFSVPSVAL TDVAQPQERY ENYVTQRQTV DLLINQAQQA 
FKNPTRISGA GFTGKLPSNM EVVAQKLLQA HQLEPYRVDL LFSAASAYIY NNNIEKALAI
YKDILKDAPD DIDALIYLSA WSRFAGQTSE SQSYFAQLKR LNPLKAQQLE QFYAVIDKAA
AMPISDTLSA QQLAQLKATQ GENAIVTLGY ALNPDGTMND VLIQRLEKTL EIAQQLPDAL
IIVTGGVPQN NQTEGKLMAD WLIKKGIKPE RIYQDNYARS TVENALYSRY ALAKHRIKNA
IIISSGSHVR RADALFTIAS WESGPHDINF LTIAALDKPL SELQKTSPAD LQGIYRDGLK
TLGLWSFRSY PLEER