Gene YpsIP31758_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1425 
SymbolcvpA 
ID5386506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1665870 
End bp1666379 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID640864408 
Productcolicin V production protein 
Protein accessionYP_001400404 
Protein GI153950398 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTGGA TTGATTACGT CATTATAGGA ATTATCGGGT TTTCTGCGTT AGTCAGTTTA 
ATTCGAGGGT TTGTCCGTGA AGCATTGTCA CTTGTAACAT GGGGATGTGC GTTTTTTGTT
GCCAGCCATT TTTACACTTA CCTTGCTGTT TATTTCACCC GATTTGAGGA TGAAATTGTT
CGCAACGGAA TTGCCATCGG CATTTTGTTC ATCGCGACAT TGATCGTCGG GGCGATTGTC
AACTATGTGA TTAGTTCACT GGTGGAGCGT ACTGGGTTAT CAGGAACCGA TAGGGTGTTA
GGGGTCTGTT TTGGGGCACT GCGAGGTGTA CTGATTGTCT CTGCCATGTT GTTCTTTCTG
GATACGTTTA CCGGCTTCTC ACAGAGTGTT GATTGGAAGC AGTCACAATT AATCCCGCAG
TTCAGTTATA TCATCAGGTG GTTCTTTGAC TACCTGCAGA GCACGTCGAG TTTCTTACCG
AATCAATTAC CGATTCGAAG CGGCTTATGA
 
Protein sequence
MVWIDYVIIG IIGFSALVSL IRGFVREALS LVTWGCAFFV ASHFYTYLAV YFTRFEDEIV 
RNGIAIGILF IATLIVGAIV NYVISSLVER TGLSGTDRVL GVCFGALRGV LIVSAMLFFL
DTFTGFSQSV DWKQSQLIPQ FSYIIRWFFD YLQSTSSFLP NQLPIRSGL