Gene YpsIP31758_1381 details

Gene Information

• Locus tag: YpsIP31758_1381
• ID: 5387363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 1620081
• End bp: 1622066
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640864363
• Product: hypothetical protein
• Protein accession: YP_001400360
• Protein GI: 153949792
• COG category: [S] Function unknown
• COG ID: [COG4907] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGGAA CCGTTCAGGC CACCGCCGAT GAGATTTCCG TGAGTACACC GGCTGTCGAA 
GCACCAAAGG GCCACGGCCT TATCCGTGCT TATGAACACA TTCTATCGTT CGATACTCAT 
GCGCGTTTTG ACGCCGATGG CAGTATGGAG ATGCGTGAGA ATATTAAGGT GTTGTCCCTC 
GGGAAACAAA TAAGCCGTGG GATTTTCCGT ACGCTGCCGT TAACCTGGAA CCGACAGGAT 
GGCAAATTTT TCAGCGTCGA ATATCAGATT AAAAATGTAT TACGTGATGG GGTGGCCGAA 
CCTTTTAGTG TGACGAAAGA AGGCGAAACA CTGATGGTCC GTATTGGTCG CGCTGACCAT 
ATATTGAAGC CCGGTATTTA TAATTATGTG ATCCAATACC AAGTCAGCAA TCATTTCAGC 
CGATTCCCCG ATTGGGATGA ACTGTATTGG AATGTGACAG GTAACGGCTG GGAATATCCT 
ATTAGTAAAG CCAGTTTCCA TCTGGAATTA CCCGCAAGCG AAGCGTTTCT AAATAGCGAA 
GGCAAAGATA CCCGGTTGAG CACGATTGAT GTTTATACCG GCAGGCTCGG CGAAAAAGAA 
CAAAATGCCA AAATTCTGGC CGATGGTAGC GTACAGACGT CGCAACCACT CAAACAAGGT 
GAAGGTTTGA CCGTCGCCTA TACTTGGCCG CGCACTATTC TTGCTAACGC ACCTGCACCG 
GAAACCTCCT CACTGTTAGT CTATCTGCTG CTGCCTACCG TGCAAACCAG CGTATTATGG 
ATACCGATAC TCCTCCTCAT TGGCTATTAC CTGCTTTGGT GGCGTAAAAA TGTTACCGCG 
ATTGGGCTGA AAATGCCGCC GATAGTGCCG CTCTATGCGC TCCCTGCCAC GCTGTCACCG 
GGCTATCTGC GTTATGTCAC TCAGCGTAAA TACGATGCGA TTGCCTTCAG TAGCGATTTG 
CTGAATTTAG TCGCTCAACG TAGCGTAGCC ATTAAAACAA AAAAGAGTAA AAACAAAAGT 
CCATGGGTTT TAAACAGCCG CGATGAACAG TGGCTATCAC TCCAATCCGA TGGCAATCAG 
CTCGATATCC ATGATAAGCA ATTACTGCAT ACGCTGTTTA GTAGCAACCG TAAGAATATC 
AATCTCAGTA AGCCCCATCA GCGGCCAATG CAGAAGGCGC TGAAGTTTTT AGAGAAACGC 
TGTGAGGATC AGCAAGAGAA GTTATTCAGT CAATGGCTTG GGCCAATATG GCGTGGAATA 
TTTATCATGC TATTGGTGCC CGTTATCTGC GGCCTGCTAT TCAATACGGG TATCGCCTTC 
ATTACTATTC CCGTTTTATT GTTGCTGCTA TTGGGCATCA ACCTCCTTTC TTTACCGCTG 
AAATTTTTAT TTAGCCCCAA ACAAGTATTG GATAGCCGGG GGGTTCTCTC TGTATGCTTC 
GCGCTATTAT TTGGCTTATT GGCTCTCCTT CCCGTTGGTC TTTTTATCTT TAACCTCCCC 
CCCTTAACCC AGTTACCGGC TGGATACTTA GGCGCTTTAT TGGTTGCTAT TTTGCTCTGC 
GTTACTTTTA CCAGGATGGT ACCCCGTTAC ACACAACGAG GGCTAAATCA TCTTGCTATC 
GCTCGCGGAC TAAAATTATA TCTTGGTACC GCAGAAAGGC ATCGCTATCA GGCCCTTTAT 
CCGCCGGACA AACTGGTTGC CCATTTTGAA AGTATGTTGC CTGTGGCTTT GGCTCTCGGC 
GTGGGTAAAA CGTGGGCGAA TAGTTTTGCA CAATATTTGG TCAGCACAGG CACCCTGTCG 
GTGGTCTTTG CCAATGCCGA CTGGAGCAGC GTGAGTCACT TCAGCCAATC CTGTAGCTCA 
TCCGCTACGG CAACCCCTAG CCGCAGTTCT GACTCCAGTT CCAGCTCCAG TTCGAGTGGT 
TCAGGCTCCT CCGGCGGGGG TTCGTCTGGT GGTGGTTCTG GCGGTGGTGG TGGTGGTGGC 
TGGTAA 

 

Protein sequence

MTGTVQATAD EISVSTPAVE APKGHGLIRA YEHILSFDTH ARFDADGSME MRENIKVLSL 
GKQISRGIFR TLPLTWNRQD GKFFSVEYQI KNVLRDGVAE PFSVTKEGET LMVRIGRADH 
ILKPGIYNYV IQYQVSNHFS RFPDWDELYW NVTGNGWEYP ISKASFHLEL PASEAFLNSE 
GKDTRLSTID VYTGRLGEKE QNAKILADGS VQTSQPLKQG EGLTVAYTWP RTILANAPAP 
ETSSLLVYLL LPTVQTSVLW IPILLLIGYY LLWWRKNVTA IGLKMPPIVP LYALPATLSP 
GYLRYVTQRK YDAIAFSSDL LNLVAQRSVA IKTKKSKNKS PWVLNSRDEQ WLSLQSDGNQ 
LDIHDKQLLH TLFSSNRKNI NLSKPHQRPM QKALKFLEKR CEDQQEKLFS QWLGPIWRGI 
FIMLLVPVIC GLLFNTGIAF ITIPVLLLLL LGINLLSLPL KFLFSPKQVL DSRGVLSVCF 
ALLFGLLALL PVGLFIFNLP PLTQLPAGYL GALLVAILLC VTFTRMVPRY TQRGLNHLAI 
ARGLKLYLGT AERHRYQALY PPDKLVAHFE SMLPVALALG VGKTWANSFA QYLVSTGTLS 
VVFANADWSS VSHFSQSCSS SATATPSRSS DSSSSSSSSG SGSSGGGSSG GGSGGGGGGG 
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