Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1353 |
Symbol | |
ID | 5386882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1583960 |
End bp | 1584562 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640864335 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001400332 |
Protein GI | 153949343 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.738988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGTG TGGCGATTAA AACCCGTAAT GCTTTCTATG AGTTCGGGTT ACTCTCTCTG CTCAAGAAAG TTCTTATAAA AGAGGATGAT ATGGATTATT CCATTGTCCC CTCTCATGAA AAAAGAGCTT CAAACAACGC GAATGTGATA TTCAAAGATC TCATGGTGAT TGTTAACATA TACCAAGAAA ATAGTTTTAT ACAGAAAAAC GATAGCAATA ATAATAAACC TATGATGACG GTTAATATTC CATTTAACAG CAGTCAGTTA GGGCTTTATG ATGTCATCTC TAAAATCAAG AAAATTCTGA ATATTGCGCG TCTGAATTAT AATATGATGA TGAAAAGTGA CCTGCAAAGA AGGATTGGTT TGAAAAACTA TATACAACTT TCGATGACGG AAAGTAAAGT TGTGCAACTC ACCGGGAAAG GGCATAGCAC GACCGATATA TCGAAAATAC TTGACCGCTC TGAAAAAACG ATATTGACCC ATCGTAGAAA TGCCATCAGA AAGTTGGGCA TGTTCAATCG GTTAGAGTTT TATAAGTATG CATCACTAAT GCGAAATTAC AGTAATAAAG ACGCTGTTTT TATTTGCCTT TAA
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Protein sequence | MFSVAIKTRN AFYEFGLLSL LKKVLIKEDD MDYSIVPSHE KRASNNANVI FKDLMVIVNI YQENSFIQKN DSNNNKPMMT VNIPFNSSQL GLYDVISKIK KILNIARLNY NMMMKSDLQR RIGLKNYIQL SMTESKVVQL TGKGHSTTDI SKILDRSEKT ILTHRRNAIR KLGMFNRLEF YKYASLMRNY SNKDAVFICL
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