| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1309 |
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| Symbol | |
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| ID | 5385026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1531986 |
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| End bp | 1533446 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640864285 |
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| Product | solute/sodium symporter (SSS) family protein |
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| Protein accession | YP_001400288 |
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| Protein GI | 153946944 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.237468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGC CATTAATTAT AATATGTACA TTCTTCCTGT TTAGTATTTA TCTTGCCATT
CGCTCTAAAA AAGGCAAGAA GATGGACCAT GAAGGGTGGA CCACCGGTGG CCGTAGCTAC
GGCGCTTTAT TAGTATTTCT ACTGAGTGCT GGGGAGATAT ACACAACATT TACATTCTTG
GGGGGCAGTG GCTGGGCTTA TGGAAAAGGC CCGGCCATAT TATATACGCT CACCGTTAAT
GCCTTTATGG GGATATCACT TTATTGGCTT CATCCTATTA TTTGGAAGTA TGCTAAAGAT
AATAATGTTA GGTCTATTTC AGACTTCTTC GCACTGAAAT ATAAAAGTTC ATCATTAGGT
ATGCTGATTA GCATATTCTC TATCGCTGCA ATGGTTCCGC TTTTCATTTT ACAATTAAAA
GGACTTGGGA TCATTGTCTC ACAAGCATCT TATGGCTCTA TATCGTCCAA TATGGCAATA
TGGATTGGCG TGATTTCAGT CTCTGTTTTT GTGATGATTT CTGGAATTCA TGGTTCTGCC
TGGACATCTG TATTAAAAGA TTTCATGATA TTGTTTGTGG TTGTCTTTAT CGGTATTTAT
ATTCCAATTC ACTACTACGG TAGTATTGGC AACATGTTTC AATCTATTGA AACAGTTAAT
CCTGGGTATC TTGTCTTCCC GAAAGAAGGA CTCAACATAC CTTGGTATAT CTCTACCGTA
TTCTTATCCG TAGCCGCTTA TTTCTGTTGG CCACACTATA TGACGGCTGT ATTTACAGCC
AAAAATGAAA CCTCATTAAA GCGTAATAGC ATACTGATTC CGGCTTACAG TCTGGTCATG
CTGTTTGCCT TTTTTGTCGG TTTTGCGGCA ATCTTAAATG TCCCTGACTT AACCGGGCCA
GATGTTGACC TGGCTTTATT TGAAATATCA AAATCAACCT TCTCAAGTTA TATTGTTGGG
TTTATTGGTG CGGCAGGTAT GCTGACAGCA CTGGTACCGG GTTCTATGTT ATTACTGGCG
ACGGCAAATA TGCTGGCCGG TGTCGTCCAA AAGATTTTCC GCCTGGATGT GGAGAAAAAT
AAATCGGGAA ATCTTTCTCG CTATATGGTG CCTGTTGTTG CCTTGGTCTC TTTGTATTTT
ATCTTTAATG GCAATGATAC GCTGGTCGCT ATAATGCTAC TTGGTGTCAA TATAATTGCT
CAGTTCTTCC CAGCGCTTAT ATTCAGTTTT TGCAAAAAGA ATCCAATCAC GACTGCGGGC
GCTTTTTCGG GGATTATGGT CGGTGTCATT ATTTTGGCGG TCACCTATGT CTATCATATT
TCAATAGCAG ATATTTTCCC GTTCATTACT AATGGCTTTG AGTATATGAA TATTGGGGTT
GTCGCCTTTG CTATGAACTT TATCGTTACT TTCTTCATCT CATATTTAAC AAGAAGCTAT
TATAAAGAAG TCACTGTTTA A
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| Protein sequence | MNAPLIIICT FFLFSIYLAI RSKKGKKMDH EGWTTGGRSY GALLVFLLSA GEIYTTFTFL
GGSGWAYGKG PAILYTLTVN AFMGISLYWL HPIIWKYAKD NNVRSISDFF ALKYKSSSLG
MLISIFSIAA MVPLFILQLK GLGIIVSQAS YGSISSNMAI WIGVISVSVF VMISGIHGSA
WTSVLKDFMI LFVVVFIGIY IPIHYYGSIG NMFQSIETVN PGYLVFPKEG LNIPWYISTV
FLSVAAYFCW PHYMTAVFTA KNETSLKRNS ILIPAYSLVM LFAFFVGFAA ILNVPDLTGP
DVDLALFEIS KSTFSSYIVG FIGAAGMLTA LVPGSMLLLA TANMLAGVVQ KIFRLDVEKN
KSGNLSRYMV PVVALVSLYF IFNGNDTLVA IMLLGVNIIA QFFPALIFSF CKKNPITTAG
AFSGIMVGVI ILAVTYVYHI SIADIFPFIT NGFEYMNIGV VAFAMNFIVT FFISYLTRSY
YKEVTV
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