| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1163 |
|---|
| Symbol | |
|---|
| ID | 5386133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1368495 |
|---|
| End bp | 1369169 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640864140 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400144 |
|---|
| Protein GI | 153948919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3683] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0000035271 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATG TGTTACATTA TAACGGTTTT ATTACAGTCA GCCGGCTGAT AACCTTGTTA
TTAACCGGGG CCGCAATGAT TTATAGCCAA TTGGCTCAAG CGCACCCCCA CAGTTTTATT
GATATGAAAA CCACTTTCAT CAATGAAAAA CAGATGCTGG TGGGAATGAA AATGGTATGG
ACCATGGATG AAATAACCTC TTCTGACCTG TTGTATGACG CAGAGAATGC CAAAAGTGAC
TCTGAAATCT GGAAGAAACT GGCCGCAGAA GTGATGGCTA ATGTGCTGGG GCAGCACTAT
TTCACCGATA TATACCGTGA TGGCCAACCG GTGAAATATA AAAATTTGCC AACAGAATAT
CATTTATCCC GTCAGGGGCA TCAGGCGGTA CTCTCATTCG TTTTACCGTT GGCTGAGCCG
CAGCCATTAG TCGGTAAGCC TTTTATTATC TCAACCTATG ACCCGACTTA TTTTGTCGAT
ATGGCCTATG CGGATCAAAA AGCGCTCAGT CTATCGGCTG AAATGGAAAA AAACTGCAAA
CTCACTTTGA TGACTCCCAA CCCAGACGCA TCGCTACAGG CTTATGCGCT GTCATTGGAT
AAAAGTGATT CACCAGGAGA CGATATGGAA CTTGGAAAAC AATTTGCCCA ACAAGTGACG
CTTCAATGTC AGTAG
|
|---|
| Protein sequence | MRYVLHYNGF ITVSRLITLL LTGAAMIYSQ LAQAHPHSFI DMKTTFINEK QMLVGMKMVW
TMDEITSSDL LYDAENAKSD SEIWKKLAAE VMANVLGQHY FTDIYRDGQP VKYKNLPTEY
HLSRQGHQAV LSFVLPLAEP QPLVGKPFII STYDPTYFVD MAYADQKALS LSAEMEKNCK
LTLMTPNPDA SLQAYALSLD KSDSPGDDME LGKQFAQQVT LQCQ
|
|---|
| |