Gene YpsIP31758_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1125 
Symbol 
ID5387990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1325249 
End bp1325905 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID640864101 
Productankyrin repeat-containing protein 
Protein accessionYP_001400106 
Protein GI153949636 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA TTAGTACTGC TTTTACTGAT CCATTGGTTA TGCCTATCGC CGATGCGATT 
GCGCACGGAG AGGTACAACA GATCCATCAT TTAGCCAATA AAGCGTTGCT GCAGCAGCGA 
GGTGATCGGT TAATAACACT GATGCAATGG GCGATCTTTA ACCAACAGCC AACCAGCCTG 
GTGGCATTAA TACAAGAACA CGCCGATCCT TCTCAATCAG GGATACAAGG TGACACGGCA 
TGGCATACCG CCGCCAGTGT GCAAGATGCA TGTTACATGC GCATTTTACT TGAGGGTCAC 
CAGCCGCCGA ATACCCGAAA CAGTGTGACT TTAGCGGTTC CATTGGCCTT AGCGGTTATG 
GCAGGGCGCG AGATTCAGGT GGGTTTGCTA TTGGCCGCGG GCGTTGATCC CAATCTTGCT 
GATCGTATGG GTGACACCCC ATTACATATA GCGGGTAAGA CCAATGCACC GGGTTTGGCC 
TTACAGTTAC TAACAGCAGG CGCTGATCCG AAATTACGTA ACAAGCAGGG TGCAACGTTC 
CAGCAGTATT TAGCGATGAC ACCATTGGAT ATTCAACACA TTGACATACA ACAAGAATAT 
CAGGAATTGA ATGATTGGTT GCGCGGTAAC GATTTTGCAG AAGTTGATGA GCAATAG
 
Protein sequence
MTKISTAFTD PLVMPIADAI AHGEVQQIHH LANKALLQQR GDRLITLMQW AIFNQQPTSL 
VALIQEHADP SQSGIQGDTA WHTAASVQDA CYMRILLEGH QPPNTRNSVT LAVPLALAVM 
AGREIQVGLL LAAGVDPNLA DRMGDTPLHI AGKTNAPGLA LQLLTAGADP KLRNKQGATF 
QQYLAMTPLD IQHIDIQQEY QELNDWLRGN DFAEVDEQ