| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1073 |
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| Symbol | yntC |
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| ID | 5388374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1278193 |
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| End bp | 1278999 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864049 |
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| Product | nickel ABC transporter, permease protein |
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| Protein accession | YP_001400054 |
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| Protein GI | 153947784 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTATA ACCCAAACCG GGCCTTGTTC CGGCTGTTCG TCTCACTGGT CTTATTATCT
ATTTTAATCG TTTATGGTTG GCTAATTTAT GGCGCTGAAG TTCCAATGGA TTTAATGGCC
CGCCGCCAAC CACCTTCAAC GACCTATTGG TTTGGTACTG ATAGCTTGGG GCGCGATTTA
TGGCTGCGCT GTTTTCAGGG AATGACTACC AGCTTGCAAA TTGGCCTGAT TGCCGCGTTT
GCCAGTGGTC TGCTCGCCAT GCTGACGGCC AGTTTATGTG CCGTTAATAA AACCCTCGAT
TATCTGATCC GTGGGTTGAT TGACAGTATG TTGGCATTGC CTCATTTATT GCTGTTAGTC
CTGATTTGCT TCACGTTAGG AGGCGGGAAA CAAGGGGTTA TCCTGGCGGT AGCATTAACC
CACTGGCCAA AGCTGGCCTT GATTTTACGT GCCGAGATTT TACGTATTCG TGAGACAGAT
TATGTGATGC TGTCTCATCG GCTGGGCAAC AGTAATTTCT ACTGTTGGCG TCATCATCTG
CTACCGTTAT TACTACCACA GTGGATTGTT GGCACACTGT TGATGTTTCC CCATGCGGTG
TTGCACAGTG CCGCACTCAG CTTTTTGGGC TTCGGGCTTG CGCCTCATGA ACCGTCATTG
GGGATATTAC TGGCCGATGC TTTACGTTAT CTGAGCAGTG GGTCATGGTG GCTGGCATTT
TTTCCTGGCT TGATTTTGGT GGGATTGGTG CTGATATTTG ATCAGTTCGC GCGATCACTA
CAACAACTCT GGGTGAGGTT AGCCTGA
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| Protein sequence | MTYNPNRALF RLFVSLVLLS ILIVYGWLIY GAEVPMDLMA RRQPPSTTYW FGTDSLGRDL
WLRCFQGMTT SLQIGLIAAF ASGLLAMLTA SLCAVNKTLD YLIRGLIDSM LALPHLLLLV
LICFTLGGGK QGVILAVALT HWPKLALILR AEILRIRETD YVMLSHRLGN SNFYCWRHHL
LPLLLPQWIV GTLLMFPHAV LHSAALSFLG FGLAPHEPSL GILLADALRY LSSGSWWLAF
FPGLILVGLV LIFDQFARSL QQLWVRLA
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