Gene YpsIP31758_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1054 
SymbolrnhA 
ID5387435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1259099 
End bp1259563 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID640864029 
Productribonuclease H 
Protein accessionYP_001400035 
Protein GI153949812 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.52553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC AGGTAGAAAT TTTCACCGAT GGCTCCTGCC TCGGTAATCC AGGCCCTGGG 
GGCTATGGCG CAATTTTACG TTACAAACAA CACGAAAAAA CGTTTAGTGC CGGCTATTAT
TTGACCACCA ACAACCGTAT GGAACTGATG GCAGCCATTG TGGCGCTTGA GGCATTGACC
TCGCCTTGCG AAGTGACCCT AAGTACTGAT AGCCAATATG TGCGTCAGGG TATCACTCAA
TGGATCCATA ACTGGAAAAA ACGCGGCTGG AAAACAGCCG ATCGTAAGCC AGTGCGCAAT
GTGGACTTAT GGCAGCGTCT GGATTTAGCT ATTCAGAGCC ATACCATACA GTGGGAGTGG
GTTAAGGGCC ATGCGGGTCA TCCAGAAAAC GAACGTTGCG ATGAACTGGC CCGGCAGGGA
GCTAATTCAC CGACACTCGA TGATACGGGC TATAACCCTG ATTAA
 
Protein sequence
MTKQVEIFTD GSCLGNPGPG GYGAILRYKQ HEKTFSAGYY LTTNNRMELM AAIVALEALT 
SPCEVTLSTD SQYVRQGITQ WIHNWKKRGW KTADRKPVRN VDLWQRLDLA IQSHTIQWEW
VKGHAGHPEN ERCDELARQG ANSPTLDDTG YNPD