| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0952 |
|---|
| Symbol | |
|---|
| ID | 5387142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1141224 |
|---|
| End bp | 1141727 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640863918 |
|---|
| Product | general secretion pathway protein C-like protein |
|---|
| Protein accession | YP_001399936 |
|---|
| Protein GI | 153947606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.257011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAAGA TAAGACTAAA AAATCCTTTT AGGACACTCA ACTGTAATCA ATTTATATTT
ATTGAATTGA GTATTGTATT TCTAGTTGCA TTTCATACAG TGATGGTTTT TTGGTCAATT
ATTTATAATG ATAGCAATGA TATGTTTATC TTGTACAATG GGCAGTCCTA CGATAGTCAA
AATTCTACCG AAAAGGCTAA GGTAATAGAC AGTAGTAACT TATCGAAAAT GTTTGATCGT
AAAATAAACA AACCAGATAA AAAAATAGAA ATGAATGATG TTCTTTTTTA TTCTCCAGAA
TATATAGGGG AAATAAAACT GGTTGGCGTA ATTGAACACT CAGCACCATC AGAGTCCATT
GCAATATTGG AAGTAAAGGG AAAGCAAACA ACACATTTAA CAAGGGAGAA TATAAATTAT
GAAGATATAG TAATAGTGAA GATATTTACT GATAGAGTGA TTATCAAGCG TAATGGTAAA
TATTATTCAT TAATAATTAA CTAA
|
|---|
| Protein sequence | MLKIRLKNPF RTLNCNQFIF IELSIVFLVA FHTVMVFWSI IYNDSNDMFI LYNGQSYDSQ
NSTEKAKVID SSNLSKMFDR KINKPDKKIE MNDVLFYSPE YIGEIKLVGV IEHSAPSESI
AILEVKGKQT THLTRENINY EDIVIVKIFT DRVIIKRNGK YYSLIIN
|
|---|
| |