Gene YpsIP31758_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0937 
SymbolagaF 
ID5386885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1122646 
End bp1123086 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content50% 
IMG OID640863903 
ProductPTS system, N-acetylgalactosamine-specific IIA component 
Protein accessionYP_001399921 
Protein GI153947292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGA TTGTTGTTTC TGGCCACATT AATTTTGCTT CTGGTATGGC TTCCGCAGTA 
CGGGCGATTA CCGGTGAGCA ATCTCAAATG CTGTTCATTG ATTTCGTTGA AAGTATGTCA 
ACAGATATGC TGGAAAGCGA ACTGCGCCGT GCGGCACATG AGGTAGACAG CGGCGAAGGT 
GTACTGTTTT TAACCGATAT TCCCGGTGGC TCACCTTGTA ATCGCGCACT GAATATTTTG 
ATGAGCGGCA GCAACGTTGA GCTGCTTGCC GGGGTTAACC TGCCAATGAT TGCGAATGCC 
GCCTTTGAAC GTGAAGGGGC TTCACTGTCA GAGCTGGTCG AAATACTGAT GGATATTGGC 
GCGTCCAGTG TACAGAACCT ACGGGCTGAG CTGGACACCG CTCTGGTTAC TGATGACGGC 
GAAAACGAGG ATGGGCTCTA A
 
Protein sequence
MIGIVVSGHI NFASGMASAV RAITGEQSQM LFIDFVESMS TDMLESELRR AAHEVDSGEG 
VLFLTDIPGG SPCNRALNIL MSGSNVELLA GVNLPMIANA AFEREGASLS ELVEILMDIG 
ASSVQNLRAE LDTALVTDDG ENEDGL