| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0918 |
|---|
| Symbol | |
|---|
| ID | 5385494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1101637 |
|---|
| End bp | 1103697 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863884 |
|---|
| Product | beta-galactosidase |
|---|
| Protein accession | YP_001399902 |
|---|
| Protein GI | 153949001 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1874] Beta-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.995798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAGT TTCCGCCCTT AAGCGCGAAA GTTTCTGCGT TATTGCATGG CGCTGACTAT
AACCCAGAGC AATGGGAAAA TTATCCTGAC ATTATTGATA AAGATATTGC CATGATGAAA
CAGGCAAAAT GCAATGTCAT GTCAGTGGGA ATATTCAGTT GGGTAAAACT TGAGCCAAGT
GAAGGAGAAT ATAATTTCTC TTGGTTAGAT GAATTAATTG AAAAACTTTA TGCTGCCGGT
ATCCATATAT TCCTGGCGAC GCCAAGTGGC GCACGTCCGG CTTGGATGTC GCAGAAATAT
CCTGAAGTTT TACGTGTCGG GCGTGATCGG GTGCCTGCGC TGCATGGTGG GCGTCATAAC
CACTGTATGA CCTCGCCGGT ATATCGCCAG AAAGTGCGGC AGATAAACCA GAAGTTAGCA
GAGCGTTACG CCCATCATCC TGCGGTTATT GGCTGGCACA TCTCTAATGA ATACGGCGGC
GAATGTCACT GTCATTCCTG TCAGCAAAAA TTCCGCCTCT GGCTTCAGGA TCGTTATCAA
ACGCTGGATA ACCTTAACGA AGCCTGGTGG AGTGCTTTCT GGAGCCACAC CTACAGCGAT
TGGTCGCAAA TTGAGTCTCC AGCACCGCAA GGTGAAGTTT CAATTCATGG TCTGAACCTT
GACTGGCGGC GTTTTAATAC CGCTCAGGTT ACGGAGTTTT GTTCTGAAGA AGCGAAGCCA
CTAAAGGCGG CAAACCCAGA GTTGCCTGTT ACGACTAACT TTATGGAGTA CTTCTACGAT
TACGACTACT GGAAGTTGGC GCAGGTGATT GATTTTATCT CCTGGGACAG CTACCCGATG
TGGCATCGTG AGAAAGATGA AACGCAGCTT GCCTGTTATA CCGCGATGTA TCATGACCTC
ATGCGTACCC TGAAACAGGG CCGTCCATTT GTCTTAATGG AATCAACGCC GAGCGCGACC
AACTGGCAAC CTACCAGTAA GTTGAAGAAG CCGGGGATGC ATATCCTCTC TTCTTTACAG
GCTGTCGCGC ACGGTGCGGA TGCGGTGCAG TATTTCCAAT GGCGTAAGAG CCGTGGCTCC
GTTGAGAAAT TCCACGGTGC GGTTGTCGAT CATGTTGGTC ACATTGATAC CCGTGTTGGG
CGGGAGGTGA GCGAACTGGG TCGTATACTC GAGGCCATGT CGCCGGTGAT GGGAAGTAAA
GTAGACGCTG ATGTTGCCAT CATTTTTGAT TGGGAAAGTC GTTGGGCTAT GGACGACGCC
GAAGGCCCAC GTAACTGTGG CTTGGAATAT GAGAAAACCG TTGCCGAGCA TTACCGTCCA
TTCTGGGAAC GGGGCATTGC GGTCGATATC ATTAATGCTG ACTGCGATCT GTCGGGTTAC
AAGCTGGTCA TTGCGCCGAT GCTCTATATG GTTCGTGAAG GGTTTGCTGA AAGGGCGACG
CGTTTTGTAG AGCAAGGTGG GCAGTTTGTC GCGACCTACT GGAGCGGTAT TGTCAACGAA
TCTGACCTGT GTCATCTCGG TGGCTTCCCT GGCCCTCTGC GGCCGCTGTT GGGTATCTGG
TCCGAAGAAA TTGACTGTCT GGCCGATGGC GAGAGCAATC AAGTCCAAGG GCTTGCAGGC
AATAAAGCCG GTCTACAGGG GCCTTATCAG GCCATCCATC TCTGCGATTT GATTCATCTT
GAAGGGGCGA CAGCCGTCGC GCGCTATAGA GATGACTTCT ATGCTGACCG TGCGGCGGTG
ACCGTAAACT TTGTTGGCGA AGGTAAAGCC TGGTATGTCG CTTCACGTAA CGATGCGGCT
TTCCAGCGTG ATTTCTTCAT GAACATTGCC GAGGAGCTAA ACTTGGCACG TGCGCTAGAC
ACCCAGTTCC CTTATGGGGT TACCGCTCAC CGTCGTACCG ATGGTGAGAG TGAATTTATC
GTGGTAGAAA ACTACAGTAA TGACAGCAAA TCGCTGGTGT TACCTGCGGT ATACCGCGAT
ATGGTCGACC AGCAGCCGGT ACAAGGTAGC CTGACGCTTG CCCCATGGGG AAGCCGAGTG
CTAACTCGCT ATCTCGAATA A
|
|---|
| Protein sequence | MSKFPPLSAK VSALLHGADY NPEQWENYPD IIDKDIAMMK QAKCNVMSVG IFSWVKLEPS
EGEYNFSWLD ELIEKLYAAG IHIFLATPSG ARPAWMSQKY PEVLRVGRDR VPALHGGRHN
HCMTSPVYRQ KVRQINQKLA ERYAHHPAVI GWHISNEYGG ECHCHSCQQK FRLWLQDRYQ
TLDNLNEAWW SAFWSHTYSD WSQIESPAPQ GEVSIHGLNL DWRRFNTAQV TEFCSEEAKP
LKAANPELPV TTNFMEYFYD YDYWKLAQVI DFISWDSYPM WHREKDETQL ACYTAMYHDL
MRTLKQGRPF VLMESTPSAT NWQPTSKLKK PGMHILSSLQ AVAHGADAVQ YFQWRKSRGS
VEKFHGAVVD HVGHIDTRVG REVSELGRIL EAMSPVMGSK VDADVAIIFD WESRWAMDDA
EGPRNCGLEY EKTVAEHYRP FWERGIAVDI INADCDLSGY KLVIAPMLYM VREGFAERAT
RFVEQGGQFV ATYWSGIVNE SDLCHLGGFP GPLRPLLGIW SEEIDCLADG ESNQVQGLAG
NKAGLQGPYQ AIHLCDLIHL EGATAVARYR DDFYADRAAV TVNFVGEGKA WYVASRNDAA
FQRDFFMNIA EELNLARALD TQFPYGVTAH RRTDGESEFI VVENYSNDSK SLVLPAVYRD
MVDQQPVQGS LTLAPWGSRV LTRYLE
|
|---|
| |