Gene YpsIP31758_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0905 
Symbol 
ID5385268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp1086964 
End bp1087644 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID640863871 
ProductPadR family transcriptional regulator 
Protein accessionYP_001399889 
Protein GI153946904 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.760063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTC ATTCAAAACA CGATCATCGT CATGGTGGTC ATCGCCATGA AGGACAGGGC 
CACTGCGGTG AAAAAATGCG TCGCGGTGGT CGCCATAATG TGATGGCAGA AGATGCAGAA 
TCGGCAAGAG GCGGCAAACA TGGGCGCGGG CGTGGCGGTA AAATGCATCG CCTGTTCGAA 
CATGGGGATT TACGCGTGGT ACTGCTGGCG CTACTGAATA AAACCCCCAG CCACGGCTAT 
GAGCTGATTA AGGCTATTGA AGAAGCGTCA TCAGGTCTAT ATGTGCCAAG CCCTGGGGTT 
ATCTATCCAA CACTGACACT GTTGGAAGAG CAGGATTTTG TCACCCCCGT GGCCACGGGT 
AATGGCCGCA AAAGTTACCA AATTACTGAC GCTGGGAAGT TTGAACTACA GAAAAACCAA 
GCTATGGTCG ATGTAATCTT TGCTCGTCTG GCGCAGGTAA ACCGTCACAA AGAGGGGAAT 
CTGGCTGAAG GTATTGCCGA TGCAATGCAC CGCTTACGCC ACATTCTACG TAGCAATATG 
ATGCGTGCGG ATCTCACGCC AGAACAAGTA GCGCGTATTA ATACGGCGCT ACTGGCTGCG 
GTAGACACCA TTGAAGAAGA GTTGCAACCG GTTGGGGTGC AACCTGCGGC AGTTGATACC 
ACTGTACAGG AGAAAAACTG A
 
Protein sequence
MFGHSKHDHR HGGHRHEGQG HCGEKMRRGG RHNVMAEDAE SARGGKHGRG RGGKMHRLFE 
HGDLRVVLLA LLNKTPSHGY ELIKAIEEAS SGLYVPSPGV IYPTLTLLEE QDFVTPVATG 
NGRKSYQITD AGKFELQKNQ AMVDVIFARL AQVNRHKEGN LAEGIADAMH RLRHILRSNM 
MRADLTPEQV ARINTALLAA VDTIEEELQP VGVQPAAVDT TVQEKN