Gene YpsIP31758_0882 details

Gene Information

• Locus tag: YpsIP31758_0882
• Symbol: prfB
• ID: 5387171
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1065207
• End bp: 1066305
• Gene Length: 1099 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640863847
• Product: peptide chain release factor 2
• Protein accession: YP_001399866
• Protein GI: 153948098
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 0.989751
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGAAA TAAACCCGGT AAAAAACCGA ATTCAGGACC TGTCTGATCG GACAGCCGTT 
CTCAGGGGGT ATCTTTGACT ATGATGCCAA GAAAGAGCGA CTGGAAGAAG TAAACGCCGA 
GCTGGAACAG CCCGACGTCT GGAATGAACC CGAACGCGCT CAAGCGTTGG GCAAAGAGCG 
TTCTACGCTG GAAGAGATTG TCACCACCAT TGATCAATTA GAGCAAGGCT TGGAAGACGT 
GTCCGGCCTG CTGGAATTAG CCGTTGAAGC TGATGATGAA GAAACCTTTA ACGAAACAAT 
TGCTGAGTTA GAGGTTCTTG ATGGCAAGCT GGGCCAGCTC GAATTCCGTC GTATGTTCTC 
TGGCGAATAT GATCGCGCCA ACTGCTATCT GGACTTACAA GCAGGCTCTG GTGGCACTGA 
AGCTCAGGAC TGGGCCAGTA TGTTACTGCG TATGTACTTG CGCTGGGCTG AGTCTAGAGG 
CTTTAAAACT GAGATCATCG AAGAATCTGA CGGTGATGTT GCTGGTTTGA AATCTGCCAC 
CGTCAAAATA ATTGGTGAAT ATGCCTTCGG TTGGTTACGT ACTGAAACTG GCGTACACCG 
TCTGGTACGT AAAAGCCCAT TTGATTCGGG CGGTCGCCGC CATACCTCTT TCAGTTCAGC 
CTTTGTCTAT CCAGAAGTTG ATGACGATAT TGATATTGAA ATTAACCCGG CAGACCTGCG 
TATTGACGTT TACCGTGCAT CCGGTGCGGG TGGTCAGCAC GTCAACAAAA CAGAATCTGC 
GGTGCGAATT ACTCATATTC CAACCAATAT CGTGACTCAA TGCCAGAATG ACCGTTCGCA 
GCATAAAAAC AAAGATCAAG CGATGAAACA GCTGAAAGCT AAGCTGTATG AGTTTGAGAT 
GCAAAAGAAA AATGCTGATA AACAGGTTTT GGAAGACAAT AAGTCCGATA TCGGTTGGGG 
TAGCCAGATC CGTTCTTATG TATTGGATGA CTCCCGTATT AAAGATTTGC GTACCGGTGT 
GGAAACACGC AACACGCAAG CTGTACTGGA TGGCGATCTG GACAAATTTA TTGAAGCAAG 
CTTGAAAGCC GGGCTATGA 

 

Protein sequence

MFEINPVKNR IQDLSDRTAV LRGYLDYDAK KERLEEVNAE LEQPDVWNEP ERAQALGKER 
STLEEIVTTI DQLEQGLEDV SGLLELAVEA DDEETFNETI AELEVLDGKL GQLEFRRMFS 
GEYDRANCYL DLQAGSGGTE AQDWASMLLR MYLRWAESRG FKTEIIEESD GDVAGLKSAT 
VKIIGEYAFG WLRTETGVHR LVRKSPFDSG GRRHTSFSSA FVYPEVDDDI DIEINPADLR 
IDVYRASGAG GQHVNKTESA VRITHIPTNI VTQCQNDRSQ HKNKDQAMKQ LKAKLYEFEM 
QKKNADKQVL EDNKSDIGWG SQIRSYVLDD SRIKDLRTGV ETRNTQAVLD GDLDKFIEAS 
LKAGL