| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0785 |
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| Symbol | |
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| ID | 5387697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 942531 |
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| End bp | 945029 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640863748 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001399769 |
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| Protein GI | 153947539 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCT CTCTCCCTGC TATTCGGTTT GACCATAGCC ACCACAAACT GGTGGTCCGC
GACAGCACGG CTCCCGTCGA TGTGCTGGGT TTTGAAGGCC ACGAAAGCTT AAGTCAGCCG
TTCTGTTACG ACATTCAATT TACCAGCGCA GACAAGGCGA TTGACCCGGC CACGATGCTG
ATGCAGGACG CGTCACTGAC ATTGGCGGCC CCGGTGGCCG AAGCCTTTGG CGTGACGGTT
CAGCAGACCC AGCGGGTGAT CCACGGCGTG GTGACCGGAT TTAAACGCCT GTCTGCTTCA
AAAGATGAAT GCCGTTACGA ACTGAGCCTG CAACCGCGTT TGGCTTTGTT GTCGCGTAGC
CATCAGAACG GGATTTATCA GGACATGTCG GTGCCGCAGA TTGTGGAAAA AATTCTGCGT
GAGCGCCATG ACATGCGCGG TCAGGATTTT GTCTTCACGC TGGCCCGCGA GTACCCCCGC
CGTGAGCAGG TGATGCAGTA CGGCGAAGAT GACCTGACCT TTATCAGCCG CCTGCTGGCG
GAAGTGGGGC TCTGGTTTCG TTTTACCGCT GACCCCAAAC TCAATATTGA TGTGGTGGAG
TTTTACGACG ACCAACGTTT TTACCCGCCA GGGCTGACGC TACAAGCGGT GCCACCTTCG
GGGATGCACG ACAGCGGCGT GGAGTCGGTC TGGGACTTGT CCAGTGCTCA TCAGGTGGTT
GAAAAATCGG TCAGTACCGG CGATTACAAC TACCGCACCG CCACTGCCGA TATGACGGCC
GGGGCAGACA TCACTCGCGG TGATACCACC ACCTACGGCG AAGCTTATCA TTACGCCGAT
AACTACCTGA TCGCAGGCAG CGAAGAGCGT GAGCCGGAAA GTGAAAGTGG GGCGTTTTAT
GCCCGCCTGC GCCATGAACG TTACCTCAAT AATCAGGCGC GTTTTTCGGG GGTGGCCAAT
GCGGCGACAC TGGGGCCGGG TCAGGAGCTG AAAGTCACCG GAAGCGATGT GCCGGCACAG
TTTGGTAAAG GGGTGATAAT CACCCGCATC ACCAGCTATG CCCGCCGTGA CCGCAGCTAT
GAAGTGCATT TTGAGGCCAT CCCTTACTCC GAAGAGTATT GCTTCCGTCC AGCGCTTATC
CGTAAGCCGA CCATGGCCGG AACCTTGCCG GCGCGGGTGA CCAGCACCAC TGCGAACGAC
ACTTATGGTC ATATCGACAA AGACGGGCGC TACCGTGTCA ACCTGATGTT CGACCGTGAC
AGTTGGGAGC CGGGTTACGA AAGCCTTTGG GTTCGTCAGG CCCGCCCGTA TGCGGGTGAC
ACCTACGGCC TGCACCTGCC GCTGCTGGCG GGCACCGAAG TGGCGATTGC GTTTGAAGAT
GGCAATCCGG ACCGGCCGTA TATTGCCTCT GTGTTGCACG ACTCGGCGCA CGGCGACCAT
GTCACCATCA GTAATTACAA ACGTAACGTA CTGCGTACTC CGTCGAATAA CAAACTGCGC
CTTGAAGATG AACGGGGTAA AGAGCACATC AAGCTCAGCA CCGAATACGG CGGCAAAAGC
CAACTGAATC TGGGGCATTT GGTTGATAAC GAGAAACAAC CACGGGGTGA AGGTTTTGAG
CTGCGTACCG ACAGTTTTGG TGCATTGCGT GCAGAAAAGG GCCTCTTTAT CAGTGCCGAC
GGTCAGGCCA AAGCCCAGGG GCAGGTGCTG GAGATGCAAC CGGCTATTAG CCTGTTGCAA
GGTGCTCAGG AACAGATGGA TGCCATCTCC GCGGATGCAC AAACCGCCAC CGCCAGTCCG
GCCGACCTGC AGGCACAAAT CAGTTTGTTG CAGCAAAATC TGAGTGAGCT GAAACAAGCC
GTGGTATTGC TGAGTGCGCC AAAAGGCATT GCCTTGAGCA GTGGTGAGCA TCTGCAAATG
TCCGCCAGCG AAAATCTGAT AGCCACTGCC GGTAAGAATA CCGACATCAG CGTAGCAAAG
AACTTCTTTA TTGGTGTGGG AAATACCTTA AGTATCTTCG TCAGAAAACT GGGGATGAAG
TTGATAGCCA ATCAGGGTCC AATAACGGTA CAGGCGCAAA ATGACCTGAT GGAGTTATTG
GCGCGCAAAG CGATAACGAT CACCAGTACC GAGGATGAGA TAAAAATCAC CGCCAAGAAG
AAGATAACGC TAAATGCAGG CGGCAGTTAT ATCACGCTGG ATGAGAACCG GATCGAGTCA
GGAACGGCGG GGGAATATCT GACCAAGGCA GGGTATTACG GGCGACAGGA AAAAGCGAAG
CAGGTAGTGG CAATGCCAGA ATTTCAGCTG ATTCCCGGTG GGAAGCATAA TCTACAATTT
CTATTTACCG ATGATGATAA TGTACCTTAT TCAAATACAC CGTATATTGC TTATCTTGTC
GATGGAAGAG AAATTAAAGG AGTGACAGAT GCAAAAGGTA ATACGGAAAA ATTTGTTACC
GATGAAGAGC AAAATATAAA AATAAATTTA CAGGTATAG
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| Protein sequence | MNTSLPAIRF DHSHHKLVVR DSTAPVDVLG FEGHESLSQP FCYDIQFTSA DKAIDPATML
MQDASLTLAA PVAEAFGVTV QQTQRVIHGV VTGFKRLSAS KDECRYELSL QPRLALLSRS
HQNGIYQDMS VPQIVEKILR ERHDMRGQDF VFTLAREYPR REQVMQYGED DLTFISRLLA
EVGLWFRFTA DPKLNIDVVE FYDDQRFYPP GLTLQAVPPS GMHDSGVESV WDLSSAHQVV
EKSVSTGDYN YRTATADMTA GADITRGDTT TYGEAYHYAD NYLIAGSEER EPESESGAFY
ARLRHERYLN NQARFSGVAN AATLGPGQEL KVTGSDVPAQ FGKGVIITRI TSYARRDRSY
EVHFEAIPYS EEYCFRPALI RKPTMAGTLP ARVTSTTAND TYGHIDKDGR YRVNLMFDRD
SWEPGYESLW VRQARPYAGD TYGLHLPLLA GTEVAIAFED GNPDRPYIAS VLHDSAHGDH
VTISNYKRNV LRTPSNNKLR LEDERGKEHI KLSTEYGGKS QLNLGHLVDN EKQPRGEGFE
LRTDSFGALR AEKGLFISAD GQAKAQGQVL EMQPAISLLQ GAQEQMDAIS ADAQTATASP
ADLQAQISLL QQNLSELKQA VVLLSAPKGI ALSSGEHLQM SASENLIATA GKNTDISVAK
NFFIGVGNTL SIFVRKLGMK LIANQGPITV QAQNDLMELL ARKAITITST EDEIKITAKK
KITLNAGGSY ITLDENRIES GTAGEYLTKA GYYGRQEKAK QVVAMPEFQL IPGGKHNLQF
LFTDDDNVPY SNTPYIAYLV DGREIKGVTD AKGNTEKFVT DEEQNIKINL QV
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