Gene YpsIP31758_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0643 
SymbolflgF 
ID5385944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp751278 
End bp752009 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID640863614 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001399635 
Protein GI153946948 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGC TTCTGTATAC CGCGGTTAGC GGGGCTAATC GCAGCCTGTC ACAACAACAG 
ATCCATGCCA ATAATCTGGC GAACACCAAT ACGCAGGGGT TCCGGGCAGA TCTGGAAAAG
GCCACCGCGA CTCAGGTAAT GGGCAGTGGC TATAACAGCC GTGTCGCGGT ACTGAGCCAA
AATGCTGGGG TGGATATGAC CCCTGCGAGT TTGCAAGAGA CCGGCCGTGA TCTGGATATT
GCCGTTAAAA ATCAGGGGCT GATCGCAGTA CTCAGTGGTG GCCGTGAAGT CTATACCCGC
AATGGTCAGA TGGAGGTTAG CGCCGACGGT GATTTAACTA TCAATGGTTT ACCGGTATTG
GGAGATGGCG GCCCGATCGT GCTCCCTCCT TACTCGGCAT TATCGATAGC CGATGATGGC
ACGATAGCGA TCATCCCGCA GGCGGGGGGC ATTAAAACCC CAGAGGAGAT TGAACGCATC
AAACTGGTGG ATATTCCTGC CAATCAACTC AGAAAAAATA ACCGCGGTTT ACTGGTCAGT
AACCGTGGCC CGGCGGCCCG TGATGAAGCG GTGCAAGTGG TGAATAAACA CCTGGAAAGC
AGCAACGTTT CTGCCATTAG CGAAATGATC GCCAGTATCT CCCTCAGCCG CCAGTTTGAG
GCGCAAATCA AAATGATGAA AGTCGCAGAG GATCTGGCGC AAGCGGGCAA CCGGATGATC
CGGGGCAGTT AA
 
Protein sequence
MDKLLYTAVS GANRSLSQQQ IHANNLANTN TQGFRADLEK ATATQVMGSG YNSRVAVLSQ 
NAGVDMTPAS LQETGRDLDI AVKNQGLIAV LSGGREVYTR NGQMEVSADG DLTINGLPVL
GDGGPIVLPP YSALSIADDG TIAIIPQAGG IKTPEEIERI KLVDIPANQL RKNNRGLLVS
NRGPAARDEA VQVVNKHLES SNVSAISEMI ASISLSRQFE AQIKMMKVAE DLAQAGNRMI
RGS