Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0643 |
Symbol | flgF |
ID | 5385944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 751278 |
End bp | 752009 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640863614 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001399635 |
Protein GI | 153946948 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGC TTCTGTATAC CGCGGTTAGC GGGGCTAATC GCAGCCTGTC ACAACAACAG ATCCATGCCA ATAATCTGGC GAACACCAAT ACGCAGGGGT TCCGGGCAGA TCTGGAAAAG GCCACCGCGA CTCAGGTAAT GGGCAGTGGC TATAACAGCC GTGTCGCGGT ACTGAGCCAA AATGCTGGGG TGGATATGAC CCCTGCGAGT TTGCAAGAGA CCGGCCGTGA TCTGGATATT GCCGTTAAAA ATCAGGGGCT GATCGCAGTA CTCAGTGGTG GCCGTGAAGT CTATACCCGC AATGGTCAGA TGGAGGTTAG CGCCGACGGT GATTTAACTA TCAATGGTTT ACCGGTATTG GGAGATGGCG GCCCGATCGT GCTCCCTCCT TACTCGGCAT TATCGATAGC CGATGATGGC ACGATAGCGA TCATCCCGCA GGCGGGGGGC ATTAAAACCC CAGAGGAGAT TGAACGCATC AAACTGGTGG ATATTCCTGC CAATCAACTC AGAAAAAATA ACCGCGGTTT ACTGGTCAGT AACCGTGGCC CGGCGGCCCG TGATGAAGCG GTGCAAGTGG TGAATAAACA CCTGGAAAGC AGCAACGTTT CTGCCATTAG CGAAATGATC GCCAGTATCT CCCTCAGCCG CCAGTTTGAG GCGCAAATCA AAATGATGAA AGTCGCAGAG GATCTGGCGC AAGCGGGCAA CCGGATGATC CGGGGCAGTT AA
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Protein sequence | MDKLLYTAVS GANRSLSQQQ IHANNLANTN TQGFRADLEK ATATQVMGSG YNSRVAVLSQ NAGVDMTPAS LQETGRDLDI AVKNQGLIAV LSGGREVYTR NGQMEVSADG DLTINGLPVL GDGGPIVLPP YSALSIADDG TIAIIPQAGG IKTPEEIERI KLVDIPANQL RKNNRGLLVS NRGPAARDEA VQVVNKHLES SNVSAISEMI ASISLSRQFE AQIKMMKVAE DLAQAGNRMI RGS
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