| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0614 |
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| Symbol | |
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| ID | 5387428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 724708 |
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| End bp | 727188 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863585 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001399606 |
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| Protein GI | 153948600 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAA TTAAAAAAAT TCCTATAGCA ATGACTACAT CATTGATAAT GCTCAGTGGA
ACAGCCAGTG CTATTGATTT TAATACTGAT GCAATGGATG CCAACGACAA ACAGAATATT
GATCTTTCTC ATTTTACGAA CGTTGGCTAT ATCATGCCGG GTGAGTATCG GTTGGAGATC
AATGTCAATA ATCACCGTAT TCCTGAGCAG GTGATCGCTT TTTATACCCG TGACGATGAA
CCGGATAGCA GTGAGGTGTG CCTACCGGAA GCGGTGATGG AGCAGTTTGG TCTGAAGCCT
GATGTGCTGC AAAAGATCAC ATTCTGGCAT GAGGGGCAAT GCGCAGATTT GCGTGAGCTG
GCGGGATTAA CCACGGAGGT TGATTTAGCG ACCAGCACGT TAGCTATCAA TGTCCCGCAA
GCCTGGATGG AATACAGTGA CAGCAATTGG GTGCCGTCTT CTCAATGGGA TGAGGGGATC
CCTGGGTTTC TGTTGGATTA CAACGTGAAC TCGCTGTTTA GTAAGCCGAA AGAGAGTGGT
TCCACCCGGA ATATCAGTCT CAACGGTACG TCGGGTCTGA ATGCGGGTCC CTGGCGGTTA
CGGGGCGATT ATCAAGGGAA CTACAGCCAC AGCAGTGGCG AGTATAACTC GTCTACCAGT
ACATTTGACT GGAGCCGGAT CTATATGTAC CGGGCGATCA AATCACTGGC AGCCACCTTG
AGCGTTGGTG AAAACTATTT CGCCTCCAGC CTTTTCGATA CGTTCCGTTA TGCTGGCGCC
AGTTTGTCCA GCGATGAACG TATGTTGCCA CCTAATTTAC GCGGTTATGC CCCTGAGGTT
AGCGGGATAG CCAGAACCAA CGCCAAAGTG ACGGTCTCCC AGCAGGGGCG CATACTGTAT
CAAACCACCG TGGCTTCCGG CCCTTTCCGT ATTCAGGAAC TGAGTGATTC TGTTTCCGGG
CGGTTGGATG TCAGCGTGGA GGAGCAGGAT GGGACGGTAC AAACTTTTCA GGTGGATACT
GCCGCAGTTC CTTACCTGAC CCGGCCTGGT GCCATCCGCT ATAAAACATC GGTGGGCCAG
CCCTCTACTC TGAATCATGG GACTGAAGGC CCGGTATTTG CCAGTGGCGA ATTTTCTTGG
GGGGTCACTA ATAGCTGGTC ACTGTTTGGC GGGGCCATTG GCTCGGGTGA TTACAATGCC
GTGTCGGTCG GGGTTGGCCG TGATTTATAT GCATTTGGTG CCATTTCAAC CGATATCACC
CAAACCCGTG CATCGGGCCT CCCCAACCAA GATACGCAGA GCGGAAAATC GTTGCGCGTC
AGGTATGCTA AGCGTTTTGA TGAGCTGAAC AGCGACATCT CGTTTGCGGG GTACCGTTTT
TTTGAACGTG AATTCATGTC GATGAATCAG TATCTCAACA CCCGTTATTT TGATAATGAC
CTTGGGCGCA ACAAGGAAAT GTATACGGTG ACGGCGAGTA AAAATTTTCC TGACATCCAG
ACCAATGTCA ATTTTTCATA CAGCTACCAG AATTATTGGG ATCAGCCCAC GTCCAATAGC
TACAGCGCGA CGATCAGCCA CGCTTTTGAT GCTTTTTCTC TCAAAGATAT GACGGTCAAC
CTTTCTGCCA GCCGTAGCAA AAATAACGGC GTGAATGATG ATGTGCTGTA TCTGAGTTTT
TCGGTGCCAT TAGGCAATCA ACAAACCCTC AGCTACAGTG GGCAACATAA TGGTCAAGGG
AACAACCAGA CCGTGAATTA TTCTAACAGC TCGGCTATCG ACAGCAGCTA TCGGTTATCC
GCAGGGGTTA ACAACAGCAA TGATAATGGG GCGCGTAGCC AGTTCAGCGG TTTTTATATT
CATCGCAGCA GCATTGCTGA AACCAGCCTT AATGTCGCTT ATGCGCAGGA TGATTTTACC
TCGACCGGGG TTTCTATGCG CGGGGGCGCG ACGGTTACTG CGAAAGGTGC GGCATTACAC
GGCCCCGGTA TGAGTGGTGG TACCCGCCTG ATGGTCAATA CCGATGATAT TGCAGGCGTC
CCGCTGGAAG AGCGGAATAT TCGTTCAAAC CGTTTTGGTA TTGCTGTGCT GAATAATATT
AACAGCTACT ATCGTACAGA TACGCGTATC GATATTAATC AGTTGGCTGA TGATGTTGAA
GTTAAGCAAT CTGCGGTGGA GTTTGCCCTG ACCGAAGGGG CCATTGGTTA TCGCCGTTTC
GCCATGATGA AAGGGGAGAA GGTACTGGCA ACTATCAGCC TGACTGACAG TAGCCATCCG
CCTTTTGGTA GTTTGGTCAT GAGTGCCAAA GGGCAGGAAC TGGGGATTGT TAGCGATGAC
GGTTTTACTT ACCTGAGTGG AGTGGAGCCG GGAGAAACAC TGAATGTACT TTGGAGTGGC
GCTAAGCAGT GCCAGGTGGC GATCCCAGCA GCATTACAGC CGCAGGCGCA AATATTATTA
CCCTGCATAT CCGTTAACTA A
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| Protein sequence | MRIIKKIPIA MTTSLIMLSG TASAIDFNTD AMDANDKQNI DLSHFTNVGY IMPGEYRLEI
NVNNHRIPEQ VIAFYTRDDE PDSSEVCLPE AVMEQFGLKP DVLQKITFWH EGQCADLREL
AGLTTEVDLA TSTLAINVPQ AWMEYSDSNW VPSSQWDEGI PGFLLDYNVN SLFSKPKESG
STRNISLNGT SGLNAGPWRL RGDYQGNYSH SSGEYNSSTS TFDWSRIYMY RAIKSLAATL
SVGENYFASS LFDTFRYAGA SLSSDERMLP PNLRGYAPEV SGIARTNAKV TVSQQGRILY
QTTVASGPFR IQELSDSVSG RLDVSVEEQD GTVQTFQVDT AAVPYLTRPG AIRYKTSVGQ
PSTLNHGTEG PVFASGEFSW GVTNSWSLFG GAIGSGDYNA VSVGVGRDLY AFGAISTDIT
QTRASGLPNQ DTQSGKSLRV RYAKRFDELN SDISFAGYRF FEREFMSMNQ YLNTRYFDND
LGRNKEMYTV TASKNFPDIQ TNVNFSYSYQ NYWDQPTSNS YSATISHAFD AFSLKDMTVN
LSASRSKNNG VNDDVLYLSF SVPLGNQQTL SYSGQHNGQG NNQTVNYSNS SAIDSSYRLS
AGVNNSNDNG ARSQFSGFYI HRSSIAETSL NVAYAQDDFT STGVSMRGGA TVTAKGAALH
GPGMSGGTRL MVNTDDIAGV PLEERNIRSN RFGIAVLNNI NSYYRTDTRI DINQLADDVE
VKQSAVEFAL TEGAIGYRRF AMMKGEKVLA TISLTDSSHP PFGSLVMSAK GQELGIVSDD
GFTYLSGVEP GETLNVLWSG AKQCQVAIPA ALQPQAQILL PCISVN
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