| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0596 |
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| Symbol | |
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| ID | 5385368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 700268 |
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| End bp | 701038 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640863568 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001399589 |
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| Protein GI | 153948137 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA TATTTAATAC TATTATTATC ATCCCAGTGA TGCTTTTTCT GTTAAGCGGT
TGTTTGAGCC AACAGGGTTT AAGCTCACAA GGTTTAAGCA CAAAAGAATT TTCTTATCGT
GAAAGTATTT TAATTAAAGC CAACAATCAA ATTGGTTTGA TTAAACTTTA TCGCGAATCA
CTAAAAAACA AAGAAGACGA ATCAATCAGA GTGAAATTAG CAAATGCCTA TTACCTCTCC
GGTGATAGCC ATTCTTCTTT ATATTATCTG CAACCTATCT CCCATAAACC TAACGTATCT
ATCTATCTTT TACAGATAAA AAACTTAATT AACGAGGGTG ATAATTCGGG TGCGACTACA
GTACTGCACA GGTTATTATC TATTGCCCCC CATAATCCTG AAGCACATAA CCTAAAAGGT
ATTATTCTGG CTAACCGTGG TGATACAGCA GGGGCGCGTA CCGCTATTAT TCAATCGCAG
GCTCTGTTTA TCCAAGAGGA CATTGCAAGA AATAATATTG CAGTTATTTC AATGTTGGAT
AACCGCTATG AAGATGCAGT AAAGATATTA CTACCAGACT ATCTTTCCGG TAAAAGAAAC
AACTTAATAT TACATAATCT GGTATTTGCA TTGATTAAAA TGGGTGACAC TCGCTACGCA
AAGAACATTA TTGAAGCAGA GCGGTTATCT GATAATGCTG ACGAGTTAGT ATTAGCGCTG
AGTCAGGTTG ATTCATTCCC TCAGGAACAA TCCGTCATTA GGGAAAAATG A
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| Protein sequence | MLKIFNTIII IPVMLFLLSG CLSQQGLSSQ GLSTKEFSYR ESILIKANNQ IGLIKLYRES
LKNKEDESIR VKLANAYYLS GDSHSSLYYL QPISHKPNVS IYLLQIKNLI NEGDNSGATT
VLHRLLSIAP HNPEAHNLKG IILANRGDTA GARTAIIQSQ ALFIQEDIAR NNIAVISMLD
NRYEDAVKIL LPDYLSGKRN NLILHNLVFA LIKMGDTRYA KNIIEAERLS DNADELVLAL
SQVDSFPQEQ SVIREK
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