Gene YpsIP31758_0475 details

Gene Information

• Locus tag: YpsIP31758_0475
• ID: 5386632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 551629
• End bp: 553698
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640863445
• Product: putative LppC lipoprotein
• Protein accession: YP_001399468
• Protein GI: 153950065
• COG category: [R] General function prediction only
• COG ID: [COG3107] Putative lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAAAT TACTGCTCGA TCGTGTTGAT TCATTGTTTC ATCCGAATTG CCGATTTAAT 
ATTGAGCATC TTGAAAAAAA CATCACTGGA TACAGTATGC TTTCCTCAAC GTTCGTTCGT 
TCTAAAGCAG GGCTTGTTCC TGTCATTCTG GCTGCTCTTA TTTTAGCGGC CTGTACAGGC 
GATGCGCCAC AAACGCCGCC CCCCGTAAAT ATACAGGACG AAGCAAGCGC TAACTCTGAT 
TATTATCTGC AACAGTTGCA GCAGAGCAGT GATGATAACA AGGCTGACTG GCAATTACTT 
GCCATTCGTG CCCTATTACG TGAGGCAAAA GTGCCTCAGG CCGCCGAACA ACTCAGCACT 
CTCCCTGCAA ACCTGAGCGA TACACAGCGC CAGGAACAGC AATTGCTGGC AGCTGAACTG 
TTGATCGCGC AGAAAAATAC GCCAGCGGCG GCTGATATTC TTGCCAAATT AGAGGCAACT 
CAACTCTCAG CTAACCAAAA AGTACGCTAC TATCAGGCCC AAATTGCCGC CAATCAGGAT 
AAAGCCACCC TGCCATTAAT TCGTGCATTT ATCGCTCAGG AACCATTACT GACAGATAAA 
GCCCATCAAG ATAATATTGA TGGCACTTGG CAGTCACTGT CCCAACTGAC ACCACAAGAA 
TTAAATACCA TGGTGATCAA CGCAGACGAA AATGTGCTGC AAGGCTGGCT GGATTTACTG 
CGTGTTTATC AAGATAACAA GCAAGACCCA GAGCTACTGA AAGCCGGGAT TAAAGACTGG 
CAAACCCGTT ACCCACAAAA CCCGGCAGCG AAAAATCTGC CAACTGCATT AACTCAGATC 
AGTAATTTCA GCCAGGCATC CACCGCCAAG ATTGCTCTGC TGCTGCCATT AAGTGGCCCG 
GCACAAGTAT TCGCCGATGC CATCCAGCAA GGTTTTACTG CCGCCCAAAA TGGCTCAGCG 
GTAACGGCTT CAGTACCAGT AACGCCAAAT GTGACGGAAA GCAGCCCAAC GGATACTGCT 
GCGGTTGTTT CGGATGATAC CCCGGCCACC CTTCCGGCCC CAGTGACCCC CCCCGTCGTC 
ACCAACGCCC AAGTAAAAAT CTACGATACC AACACTCAAC CACTGGCAGC GCTATTGGCT 
CAAGCCCAGC AAGATGGTGC AACACTGGTC GTTGGCCCTC TGCTAAAACC CGAAGTTGAG 
CAACTCAGTG CCACCCCAAG CACATTGAAT ATTCTGGCGT TGAACCAACC AGAAGCCAGT 
AATAACAGCC CAAACATCTG TTACTTTGCC CTATCGCCAG AAGATGAAGC CCGTGATGCA 
GCGCATCACC TGTGGGAACA GCAAAAAAGA ATGCCGCTGT TGCTGGTGCC TCGTGGTGCC 
CTTGGTGAAC GCATTGCCAA AGCCTTCGCT GACGAGTGGC AAAAACAAGG TGGGCAAACG 
GTATTACAAC AGAACTTCGG TTCAACCACT GAGTTGAAGC AATCCATCAA CAGTGGTGCC 
GGTATCCGCC TGACCGGTAC CCCCGTTAGC GTTTCTAATG TAGCCGCCGC CCCGGCCTCC 
GTCACTATTG CGGGCCTGAC CATTCCAGCA CCGCCAATCG ATGCACCGGT AGTGTCAACG 
TCTTCGAGCG GTAACATTGA TGCGGTCTAT ATCATTGCGA CGCCATCTGA ATTAACCCTG 
ATTAAGCCAA TGATTGATAT GGCAACCAGT TCACGCAGTA AACCTGCGCT GTTTGCCAGT 
TCACGTAGCT ACCAGGCTGG CGCTGGCCCA GATTACCGTC TGGAAATGGA AGGTATACAG 
TTTAGTGATA TTCCGCTGAT GGCCGGCTCT AACCCCGCTT TGCTGCAACA AGCATCGGCT 
AAATACGCTA ACGATTATTC TCTGGTACGC TTATACGCCA TGGGGATTGA TGCCTGGGCA 
TTGGCAAATC ATTTTTCTGA AATGCGCCAA ATCCCTGGCT TCCAAGTCAA AGGGGTCACC 
GGTGATTTAA CTGCATCATC AGATTGTGTT ATCACCCGCA AGCTACCTTG GTTACAATAT 
CGCCAGGGAA TGGTGGTGCC ACTCGCATAA 

 

Protein sequence

MQKLLLDRVD SLFHPNCRFN IEHLEKNITG YSMLSSTFVR SKAGLVPVIL AALILAACTG 
DAPQTPPPVN IQDEASANSD YYLQQLQQSS DDNKADWQLL AIRALLREAK VPQAAEQLST 
LPANLSDTQR QEQQLLAAEL LIAQKNTPAA ADILAKLEAT QLSANQKVRY YQAQIAANQD 
KATLPLIRAF IAQEPLLTDK AHQDNIDGTW QSLSQLTPQE LNTMVINADE NVLQGWLDLL 
RVYQDNKQDP ELLKAGIKDW QTRYPQNPAA KNLPTALTQI SNFSQASTAK IALLLPLSGP 
AQVFADAIQQ GFTAAQNGSA VTASVPVTPN VTESSPTDTA AVVSDDTPAT LPAPVTPPVV 
TNAQVKIYDT NTQPLAALLA QAQQDGATLV VGPLLKPEVE QLSATPSTLN ILALNQPEAS 
NNSPNICYFA LSPEDEARDA AHHLWEQQKR MPLLLVPRGA LGERIAKAFA DEWQKQGGQT 
VLQQNFGSTT ELKQSINSGA GIRLTGTPVS VSNVAAAPAS VTIAGLTIPA PPIDAPVVST 
SSSGNIDAVY IIATPSELTL IKPMIDMATS SRSKPALFAS SRSYQAGAGP DYRLEMEGIQ 
FSDIPLMAGS NPALLQQASA KYANDYSLVR LYAMGIDAWA LANHFSEMRQ IPGFQVKGVT 
GDLTASSDCV ITRKLPWLQY RQGMVVPLA