Gene YpsIP31758_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0468 
Symbol 
ID5385567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp544363 
End bp545286 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content51% 
IMG OID640863437 
Productradical SAM family protein 
Protein accessionYP_001399461 
Protein GI153949697 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAC AGCAATTAGT CAATATGTTT GGTGCGGACT TACAGCGCCG TTATGGTGAA 
AAAATTCATA AACTCACGCT GCATGGCGGG TTCAGTTGTC CGAATCGTGA TGGAACTCTG
GGGCGTGGTG GTTGTACTTT TTGTCAGGTT GCCTCCTTTG CTGATGAGCA AATGCAGCAA
CAAAGTATCA CTCAGCAGCT CGCGATACAG GCCAAAAAAG CCAATCGAGC GAATCGTTAT
CTGGCTTATT TTCAGGCCTA TACCAGTACT TATGCAGAGG TGAATGCGTT AGCTGCAATG
TATCAACAGG CATTGTGTGA GGCCGATATT GTGGGCCTGT GCGTGGGTAC TCGCCCGGAT
TGTGTGCCCG ATGCCGTTCT GGATTTGCTG AGCAGTTATC AGCAACAAGG TTATGAAGTT
TGGCTCGAGC TGGGTCTACA AACAGCTAAT GATAAAACAC TCAAACGTAT TAACCGTGGA
CATGATTTTG CTTGCTACCA GCAAACGGCC CGCCGTGCTC GCGCTCGTGG CCTGAAAGTG
TGTTGCCATT TAATTGTGGG TTTACCAGGA GAGGATCGGG CGCAGGGGAG GGAAACCTTG
GAAAAAGTGG TCACCACCGG TGTTGATGGG ATAAAACTGC ATCCACTGCA TATCGTGGAA
GGCAGTACGA TGGCGAAAGC CTGGCGGGCG GGGCGCTTAA CGGCGTTGGC GTTGGAGGAT
TATGTCCTCA CCGCAGGTGA AATGATTCGC CATACACCCG CAGAGGTTGT CTATCATCGG
ATTTCTGCCA GTGCGCGTCG CCCTACATTG CTGGCCCCCT TGTGGTGTGA GAATCGTTGG
ACAGGCATGA ATGAGCTGAA TAATTACCTA CTCCAGCATG GCGTACAGGG CACCGCGATT
GGGGATGCTT ATTGCTATCG TTAA
 
Protein sequence
MQLQQLVNMF GADLQRRYGE KIHKLTLHGG FSCPNRDGTL GRGGCTFCQV ASFADEQMQQ 
QSITQQLAIQ AKKANRANRY LAYFQAYTST YAEVNALAAM YQQALCEADI VGLCVGTRPD
CVPDAVLDLL SSYQQQGYEV WLELGLQTAN DKTLKRINRG HDFACYQQTA RRARARGLKV
CCHLIVGLPG EDRAQGRETL EKVVTTGVDG IKLHPLHIVE GSTMAKAWRA GRLTALALED
YVLTAGEMIR HTPAEVVYHR ISASARRPTL LAPLWCENRW TGMNELNNYL LQHGVQGTAI
GDAYCYR