Gene YpsIP31758_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0366 
Symbol 
ID5384566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp427143 
End bp428132 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content51% 
IMG OID640863335 
Productcarbohydrate ABC transporter permease 
Protein accessionYP_001399359 
Protein GI153947385 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGC TAAAACTGCG CCAACTCACG GGGCACCATG AGTTTTATCT CGGGTTGCTG 
GTGTTGCTGT TGGCTATCGG GTTGAGTGTG CAAAGCCCTG AGTTCCTGAC ATTGGGGAAT 
TTAACCGATG TGGCGACCAG CTATGCCATT TTGGGGATTT TAGCCTGCGG TCTATTTGTG 
GTGCTGATTG CTGGTGGCAT TGATATCTCT TTCCCGGCGG TCACGGCTAT CGCGCAGTAT 
GTGATGGCAT CGTGGGTGAT TACACAGGGT GGCAGCTTCC CGCTGGCATT GGTCATGGCA 
ATGGCGGTTG GCCTGCTACT GGGGCTGATC AACGGATTAC TGGTTTATTG GCTGAAAGTC 
CCGGCGATCA TTATCACCAT CGCCACGCTG AATCTGTTTT ATGGGCTGCT GGTTTACTTT 
ACCAACGGGA CTTGGTTGTA CGGCTTCCCA GACTGGTTTA TGACCGGTAT TAACTGGTTC 
TCATTTGAAG GCAGTGACGG TTACGACTAC GGCCTGACAC TGCCGCTGTT ATGTCTGGCG 
GGCACCATCA TCTTCACCGG TGTCATGATG AATTACACCC GGTTAGGGCG GCAGATTTTT 
GCCATGGGCA GCAATAAAGA TGCCGCCTCT CGTCTTGGCA TTAACATCTT TCGGTTGCAC 
CTGTATGTCT ACGGCTACAT GGGTATATTG GCAGGCGTGG CGGCGGTAGT ACAGGCTCAG 
ATTTCCCAAT CAGTCGCACC TAACTCTTTG ATGGGATTTG AGTTAACGGT ATTGGCTGCG 
GTGGTCCTTG GTGGCACCAG TATGAGCGGT GGACGCGGAT CACTGACCGG AACGGTGCTG 
GGTGTCATGT TATTGGCTTT TCTGCAAAAC GGCTTAACGC TGCTGAGTGT CTCTTCTTAT 
TGGCATACCG TTTTCAGTGG CGTGATTATT TTGGTGAGTA TCAGTACCAC CGCGTGGAAT 
GAAAAACGCA AGTTGTTGAG GGAGCACTGA
 
Protein sequence
MDKLKLRQLT GHHEFYLGLL VLLLAIGLSV QSPEFLTLGN LTDVATSYAI LGILACGLFV 
VLIAGGIDIS FPAVTAIAQY VMASWVITQG GSFPLALVMA MAVGLLLGLI NGLLVYWLKV 
PAIIITIATL NLFYGLLVYF TNGTWLYGFP DWFMTGINWF SFEGSDGYDY GLTLPLLCLA 
GTIIFTGVMM NYTRLGRQIF AMGSNKDAAS RLGINIFRLH LYVYGYMGIL AGVAAVVQAQ 
ISQSVAPNSL MGFELTVLAA VVLGGTSMSG GRGSLTGTVL GVMLLAFLQN GLTLLSVSSY 
WHTVFSGVII LVSISTTAWN EKRKLLREH