| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0048 |
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| Symbol | yscU |
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| ID | 5798283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 31593 |
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| End bp | 32657 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641337859 |
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| Product | type III secretion appartus protein YscU |
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| Protein accession | YP_001604479 |
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| Protein GI | 162417792 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.000158953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAG AAAAGACAGA GCAACCCACC CCGAAGAAAA TCCGTGATGC GCGCAAAAAG
GGACAGGTAG CGAAAAGTAA GGAAGTGGTC TCTACTGCGC TTATCGTCGC GCTGAGTGCG
ATGTTAATGT GGCTTTCTGA CTACTATTTC GAGCATTTTA GTAAGCTGAT GCTAATCCCC
GCAGAGCAGA GCTATCTTCC TTTCTCGCAG GCGCTTAGCT ATGTGGTTGA CAATGTGTTG
CTCGAGTTTT TTTATCTCTG TTTTCCTTTG TTAACAGTGG CGGCATTAAT GGCGATCGCA
TCTCATGTTG TGCAGTATGG TTTTCTTATA AGTGGTGAAG CAATTAAACC GGATATTAAA
AAAATCAATC CAATAGAGGG TGCCAAGCGT ATCTTTTCCA TCAAAAGTTT AGTGGAGTTT
CTCAAATCCA TTCTCAAGGT TGTTTTGCTC AGTATACTCA TCTGGATAAT CATTAAGGGA
AATCTAGTCA CACTCTTGCA GTTGCCAACC TGTGGAATTG AATGTATTAC CCCTTTATTG
GGGCAAATAC TCCGGCAGTT GATGGTTATC TGTACTGTTG GCTTTGTGGT CATCTCCATA
GCCGACTATG CCTTTGAATA CTATCAATAT ATTAAGGAAC TTAAAATGAG CAAGGATGAG
ATCAAACGCG AGTACAAAGA AATGGAGGGT AGCCCAGAAA TCAAAAGCAA GCGTCGTCAG
TTTCATCAAG AGATCCAATC GAGGAACATG CGGGAAAATG TTAAACGCTC ATCAGTGGTG
GTAGCTAATC CGACCCATAT TGCTATTGGT ATTCTTTACA AGCGAGGGGA AACACCACTA
CCGTTGGTAA CATTCAAATA TACCGATGCC CAAGTTCAGA CTGTGCGCAA AATAGCAGAA
GAAGAAGGGG TGCCTATTTT ACAACGTATC CCATTAGCCC GTGCTCTTTA TTGGGATGCG
CTCGTCGATC ACTATATTCC GGCTGAGCAA ATAGAGGCCA CAGCTGAAGT GCTACGATGG
CTAGAAAGGC AAAATATCGA GAAACAACAT TCCGAAATGT TATAA
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| Protein sequence | MSGEKTEQPT PKKIRDARKK GQVAKSKEVV STALIVALSA MLMWLSDYYF EHFSKLMLIP
AEQSYLPFSQ ALSYVVDNVL LEFFYLCFPL LTVAALMAIA SHVVQYGFLI SGEAIKPDIK
KINPIEGAKR IFSIKSLVEF LKSILKVVLL SILIWIIIKG NLVTLLQLPT CGIECITPLL
GQILRQLMVI CTVGFVVISI ADYAFEYYQY IKELKMSKDE IKREYKEMEG SPEIKSKRRQ
FHQEIQSRNM RENVKRSSVV VANPTHIAIG ILYKRGETPL PLVTFKYTDA QVQTVRKIAE
EEGVPILQRI PLARALYWDA LVDHYIPAEQ IEATAEVLRW LERQNIEKQH SEML
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