Gene YpAngola_A4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4017 
Symbol 
ID5802496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4274987 
End bp4275871 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID641341803 
Productcarbohydrate ABC transporter permease 
Protein accessionYP_001608310 
Protein GI162418723 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGC TAACCCCCCG ACTGAAACGT AACCTGGTTC CGTGGCTGTT CCTGGCCCCG 
GCACTGGTCA TCTTCACCTG GTTTAAATTC ATCCCGATGT TGCAAGGGCT GGTGATGAGT
TTCTACAAGG TTAACTTTAA CCAGCCAAAC GAGTGGGTCG GGTTTGCCAA CTTTTCCCGC
GCCTTTGGTG ATGAAGCGCT GCACTCGGCT GTTTTCAACA CGTTGTTATA TGTCCTGGTC
ACCATGGTGG TGGCCGCGTT TATCGCCTTC TTTCTGGCGA TGTTATTGGA AGGGCCGGCA
CGGCATTTGC GTTTTATTCG TACCGCCATC TTCCTGCCCG CAGTGACCAG TGCGGCGATT
GTCGCCGAAA TGTGGCGCAT TCTGTTCAAC CCGACCAGCA ACGGGGTGGT GAACCACGTT
TTATCGTGGT TCAGCATTGA AGCGCAGGGG TTTCTGGCGG ATACCGATCA GGCGTTGTGG
ACAGTAATGC TGCTGCATAT CTGGAAAGCC GTGCCTTACA ACATGGTGAT TTTTATCGCC
GGGCTGGTAG GGATTAGCCG TGATTTATAC GACGCGTCAA ACGTGGATGG GGCCAACTGG
TGGAACCGCC TGCGTTATGT GACGTTACCG GGCATGATCC CCGCGCTTTC TGTGGTCCTG
ATGCTGTCAT TTATCCGTGG CTTCCGTGTG TTTGCCGAAG TTTACGCCAC CACTGGTGGT
GGCCCGTCTA ATGCGACGGA AATGATCATG ACGCATATCT ATAAATTGGG CTTTGAGCAG
TTTGATTATG GTTATGCCTC TGCGGTGTCT TTCCTGTTAT TTGCATTCAC TGTGGTGCTG
ACGATAGGTC ATCTCACCTT GAAAAAACGG ATCGCCCGTT ACTAA
 
Protein sequence
MITLTPRLKR NLVPWLFLAP ALVIFTWFKF IPMLQGLVMS FYKVNFNQPN EWVGFANFSR 
AFGDEALHSA VFNTLLYVLV TMVVAAFIAF FLAMLLEGPA RHLRFIRTAI FLPAVTSAAI
VAEMWRILFN PTSNGVVNHV LSWFSIEAQG FLADTDQALW TVMLLHIWKA VPYNMVIFIA
GLVGISRDLY DASNVDGANW WNRLRYVTLP GMIPALSVVL MLSFIRGFRV FAEVYATTGG
GPSNATEMIM THIYKLGFEQ FDYGYASAVS FLLFAFTVVL TIGHLTLKKR IARY