| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3942 |
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| Symbol | |
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| ID | 5802420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4189820 |
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| End bp | 4191031 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641341730 |
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| Product | YscD/HrpQ family type III secretion apparatus protein |
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| Protein accession | YP_001608240 |
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| Protein GI | 162419893 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02500] type III secretion apparatus protein, YscD/HrpQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG TATTCAAGCT TCGCCTGTTA AATGGTGATC TCAATGGTCT TGAGCTGATA
TTACCGGAAG GTGAATTTAC ACTGGGGGAG CAGGGGTGTG ATGTTCTGCT GCCTTTATCT
GACGGCAATA TAGTGACGCT ATGTGTTAAT GAATATCAGG TAATGATACA GGTGGCGGAG
GAGGTTTGGA TTAATGGTGC ACAGCACGAT TTACACACTC CCCTTCCACT GTTGCAATCT
ATTGAAATTG CCGGATTGGT ATTCGTTCTG GGTGAACAAA CGGATATTTT GAGTGGAATT
AAAGTCACTC ACCGTGCGAG GTTCCCTTTA TTGGTATGGC TAGCTATTGC GATATGTGTC
CCCTTATCAC TGCTGTTTGT TTTTTTATTT TGGTTAACCA CTCAGCCTGA GACATTACGT
GCTTCGATTC CTGCGGATGT CCCGACGCAA TTAGCCGAAC GCCTGCGCGA ACCCGCTTTA
CAGGGAATAA AGGGAACCTG GCTAGCGGAT GGGAGTGTCA CATTAAGTGG GCATTGTGCC
TCGTCCTCAA TGATGGAACC ACTGCAACAT TTTTTACTGC GTAACCATAT CGCCTTTCGT
AACCAATTGG TGTGTGATGA TCGCTTAATC GCTTCCGTTA GCGATCTATT ACATCAGCAT
GGTTACCACG ATATTGAGGT GCGCATCGGT GATGAACCGG GAAATATTGT GATTTATGGT
GCCGTTCAAA TGGGTGATCA GTGGTTAACC GTGCAGGACA CGCTGGCGGC GGTCTCAGGG
TTGAAAGGTT GGCTGGTGGT TAATGCTCAT TCAGGGCAAA TACAACAACT GGTGGAGCGC
TTGAGAGCGG CAGGCTTATT AGGATTCTTA AGCATGACGG AAAGTAATAA AGAGTTGGCC
ATCAGTGGTG TGCTGTCATC TGAACAGCAG CAGTTAAAGG AGACATTGGC CGCTTTATCT
CAGCAGCAAC CCGGTTTTCC GTCAGTCAGG TATCAGAATA TTCCGGCGTC AGACCGAACG
GATCAATTTC TTCCGGCAAA GGTCGTGAGC TATGGAGGAA ATACCCAGTC GGCATTTGTG
CGGTTAGCCA ATGGTGGGCG TTTGCAGCAA GGGAGTGTGT TGGCAAATGG CTATAAAGTG
GTTTTTATTG GGGAACAGGG ACTGACGTTA TTAAAAGCAA ATAATTTAGT ACATATCCCC
ATGGATTTCT AA
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| Protein sequence | MTTVFKLRLL NGDLNGLELI LPEGEFTLGE QGCDVLLPLS DGNIVTLCVN EYQVMIQVAE
EVWINGAQHD LHTPLPLLQS IEIAGLVFVL GEQTDILSGI KVTHRARFPL LVWLAIAICV
PLSLLFVFLF WLTTQPETLR ASIPADVPTQ LAERLREPAL QGIKGTWLAD GSVTLSGHCA
SSSMMEPLQH FLLRNHIAFR NQLVCDDRLI ASVSDLLHQH GYHDIEVRIG DEPGNIVIYG
AVQMGDQWLT VQDTLAAVSG LKGWLVVNAH SGQIQQLVER LRAAGLLGFL SMTESNKELA
ISGVLSSEQQ QLKETLAALS QQQPGFPSVR YQNIPASDRT DQFLPAKVVS YGGNTQSAFV
RLANGGRLQQ GSVLANGYKV VFIGEQGLTL LKANNLVHIP MDF
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