Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3548 |
Symbol | yntB |
ID | 5802024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3771817 |
End bp | 3772785 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641341363 |
Product | nickel ABC transporter permease |
Protein accession | YP_001607876 |
Protein GI | 162421238 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00865819 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0646606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGGA TCTCGCTGTT TACTCTGCGC TTAATTTGCC TGCTGCTGGT CACCGCAGCC GGTACTTTTA CATTGCTGAG TTTTTCCCCT GTTGACCCTA TACGTGCCTA TATTGGTAGC GATTTACTGC ATGTGCCGCC AGAGCAATAC CCACTGATTG CGGCTCGTTG GGGGCTGGAT TTACCTTTGT GGCAACGTTT TTTGCATTGG TTTACTCAAG TGCTCCAAGG GGATTTTGGT TACTCGATGC TGTATAACGC GCCGGTTTCT CAGGTGATAG GTGAGCGTTT TGCTACCTCG TTTGCGTTAT TGGTATCGGC CTGGCTATTT TCGGGAATTG TCGGGTTGCT ATTGGGGTTG ACCGCTGGGC GCTATCTCAA CCGTTGGCCT GATCGTCTGA TTTCAACGTT GTCCTATTTA TTGGCATCGT TGCCCACCTT TTGGATCGGT CTATTGTTGT TGTCGTTATT TGCGGTGAAG CTCAATTGGG CCCCCATTTG CTGTGCATGG ACGCCAGGGA GTCAGGCCGA GACCGCCAGT TGGGGGGATA AGCTTCACCA CCTGATTTTA CCGATGCTAG CGCTGGGGTT ACTGGGGGTT GGGAACATTG CACTGCATAC CCGTGCCAGA GTTGCTGAAG TGATGAATAG CGAATTTATT CGCTATGCAC AGGCGCAGGG GGATAAAGGC TGGCCTTTGG TGAACTTCCA TATTTTACGC CATGCCATTA CACCCGCGCT TTGCCTGCAA TTCGCTTCAG TTGGCGAATT ACTGGGGGGG TCTTTATTGG CCGAAAAAGT GTTCGCCTAT CCCGGTTTGG GGCAGGCGAC GATTGATGCC GGGTTGCATG GTGACATTCC ACTCTTGATG GGAATAGTGA TGTTCTGCGC CATATTGGTC TTTTGCGGTA ATAGCATTGC GAATGCCTTG TTACACCGTT TGAACCGGGG GGCTGCGCGG CAATTATGA
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Protein sequence | MKGISLFTLR LICLLLVTAA GTFTLLSFSP VDPIRAYIGS DLLHVPPEQY PLIAARWGLD LPLWQRFLHW FTQVLQGDFG YSMLYNAPVS QVIGERFATS FALLVSAWLF SGIVGLLLGL TAGRYLNRWP DRLISTLSYL LASLPTFWIG LLLLSLFAVK LNWAPICCAW TPGSQAETAS WGDKLHHLIL PMLALGLLGV GNIALHTRAR VAEVMNSEFI RYAQAQGDKG WPLVNFHILR HAITPALCLQ FASVGELLGG SLLAEKVFAY PGLGQATIDA GLHGDIPLLM GIVMFCAILV FCGNSIANAL LHRLNRGAAR QL
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