Gene YpAngola_A3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3259 
Symbol 
ID5801737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3459682 
End bp3460587 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content36% 
IMG OID641341087 
Productprepilin peptidase 
Protein accessionYP_001607609 
Protein GI162419051 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000482568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000925794 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATGT TGCAGGAAAA ATTATATTCT TTAAATGAAC CACTCGGTCT GATAGAGGTA 
AACATGATGG ATATACAGGT TTTTTTTGTG AGCTATTTAA TTTTTGGGGC CATGGTAGGC
AGCTTTCTTA ATGTTTTAAT CTATAGATTG CCTATTATGC TGGCTAATTT ATCATCACGA
TCTGAGTCAC ACGGTGAAGA AATTAAGATG CGTTCTCATT TGAGAAATAT TAATTTATTT
CAACCCGGCT CTTTTTGCCA TCATTGCAAT GAGTCAATAC CAATAAAATA TAATATACCG
ATACTCGGTT GGATTTTTCT GCGTGGTGCC AGTCGTTGTT GTAACAAGAA GATAAGCACC
CGCTATCTAT TTATTGAAGT ATTAGCTGTC ATTCAAACAC TCTTGGTTCT TATGATTTTT
AAAGAGGACT TACTTATCTG CACTAGCTTG GTGCTAATTT GGTCACTTAC GGCATTGGCA
TTTATAGATT TCGATACCTA CCTCCTTCCT GATTGTATGA CAATACCTTT GCTGTGGCTT
GGTCTTCTTA TCAATATAGA TACGGTTTTT GCACCACTAA CCTCTGCAGT ACTGGGTGCT
GTCAGTGGAT ACCTTTTTCT TTGGCTATCA TATTGGTTGT TTAAAATAGT AAGAGGTGTT
GATGGAATGG GCTATGGTGA TTTTAAATTA ATGGCCGCAT TAGGTGCTTG GTTTGGTGTG
AGTGCAGTAC CTTTTTTAAT ATTGTTCTCT TCCTTTTTTG GTCTTGTCGC ATATGCTATT
TTTTATTTTT TTGATAAAAA AGATAATGGA AAAGAGATTA ATTACATCGC ATTTGGCCCT
TATATTTCAT TGGCGGGTGT TCTATACCTG TTTCTTGGGA GTCATGTGAC TAATTTATTT
TCTTAA
 
Protein sequence
MGMLQEKLYS LNEPLGLIEV NMMDIQVFFV SYLIFGAMVG SFLNVLIYRL PIMLANLSSR 
SESHGEEIKM RSHLRNINLF QPGSFCHHCN ESIPIKYNIP ILGWIFLRGA SRCCNKKIST
RYLFIEVLAV IQTLLVLMIF KEDLLICTSL VLIWSLTALA FIDFDTYLLP DCMTIPLLWL
GLLINIDTVF APLTSAVLGA VSGYLFLWLS YWLFKIVRGV DGMGYGDFKL MAALGAWFGV
SAVPFLILFS SFFGLVAYAI FYFFDKKDNG KEINYIAFGP YISLAGVLYL FLGSHVTNLF
S