| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2641 |
|---|
| Symbol | |
|---|
| ID | 5801113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 2761346 |
|---|
| End bp | 2761696 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641340508 |
|---|
| Product | pectin degradation protein |
|---|
| Protein accession | YP_001607047 |
|---|
| Protein GI | 162420156 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.229328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGT TCTTTATCAA TGATGAAACT CCTTGGGAAG AGTTAGGCAA TGGCATTAAA
CGCAAAGTGA TGACCTGGAG CGATGAGCTG ATGATGGTCT GTGTTCACTT TGAAAAAGGG
GCTATTGGTG TCGCTCATAA ACACGATATC CATGACCAGA TTGCTTATGT TGCAGCAGGT
AGCTTCGAAG TAGAGATTGA AGGGCAAAAA CGTATTTTGA AAGCAGGGGA TGCGTATCGC
GCGGTGAAAA ATGAAATGCA CGGTGCAGTA TCGTTGGAAG ACAACAGCAT CTTGATTGAT
ACTTTTACGC CTAAACGGGA TGATTTTGAG ACTGTAAACA ATATTGTGTA A
|
|---|
| Protein sequence | MKMFFINDET PWEELGNGIK RKVMTWSDEL MMVCVHFEKG AIGVAHKHDI HDQIAYVAAG
SFEVEIEGQK RILKAGDAYR AVKNEMHGAV SLEDNSILID TFTPKRDDFE TVNNIV
|
|---|
| |