Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2628 |
Symbol | |
ID | 5801100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2751606 |
End bp | 2752289 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641340496 |
Product | multiple drug resistance protein MarC |
Protein accession | YP_001607035 |
Protein GI | 162421807 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000653473 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAGTA TTTTCGAATT ATTTAAAGCC GTTGGCTTAG GATTAGTATT GCTGCTGCCA TTGGCAAATC CACTGACGAC GGTGGCCTTA TTGCTAGGGT TATCCGGTAA TATGACCCGC GAGGAGCGTA ATAATCAGTC GTTAATGGCG GCAATTTATG TCTTCTTTAT CATGACTATC GCGTTTTATG CCGGTCAGAT CGTCATGAGT ACATTTGGTA TCTCTATTCC CGGTCTGCGT ATAGCTGGTG GCTTAATTGT CGCGTTTATT GGTTTTCGTA TGCTCTTTCC GCAACAATCG GCTGAAGATA CTCAACTGGA GGCAAAATCC CAGGATTTAA AAAAACGTAA ATCCATCAAT ATTGCCTTTG TACCGCTGGC AATGCCGAGT ACTGCGGGGC CAGGTACGAT TGCAATGATC ATCAGTTCCG CTGCAACAAT GAAAGACCAG ACAATGTTTG CACCATGGGT ATTGGCCATC GCCCCCGTAA TCACATTCTT ATGCGTTTCG TTGATTTTGT GGGGATCTTT ACTCAGCTCA GGAGCGATTA TGCGCTGGGT TGGTAAAAGC GGTATTGAAG CAATTTCACG TTTGATGGGA TTCTTGCTGG TATGTATGGG TGTGCAATTT ATTATTAATG GCGTCTTAGA GTTGATCTCA ACTTATCAAC CTGTCATGGC TTAA
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Protein sequence | MLSIFELFKA VGLGLVLLLP LANPLTTVAL LLGLSGNMTR EERNNQSLMA AIYVFFIMTI AFYAGQIVMS TFGISIPGLR IAGGLIVAFI GFRMLFPQQS AEDTQLEAKS QDLKKRKSIN IAFVPLAMPS TAGPGTIAMI ISSAATMKDQ TMFAPWVLAI APVITFLCVS LILWGSLLSS GAIMRWVGKS GIEAISRLMG FLLVCMGVQF IINGVLELIS TYQPVMA
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