Gene YpAngola_A2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2449 
Symbol 
ID5800919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2567982 
End bp2568848 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content54% 
IMG OID641340324 
Productputative spermidine/putrescine ABC transporter permease 
Protein accessionYP_001606868 
Protein GI162420043 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCT GGCGCAACGA CCTGCTTGCC TGGTCGCTGA TGTTGAGTGG CCTGGGCACC 
ATTCTGTTAT TGATGGGTTC CACCTTTTAT GTCGTGGTGG TGCAGAGCCT CGGTTACTTC
AACCTTGAAG GGGAAAGCCA TTTTTCGCTG GAGTTCTGGC GTAACATGTT GCAGGACGAG
GTGCTGCATA GCGCCCTATT CTACTCGGTA AAAGTTTCGG TGCTGGGCGC GTTTGGTTCG
GTAATCTTCG CGTATCCGCT GGCGTTATGG CTGCGCAAGC CGCTGATCGC TAAAGAAGGT
ATTATCGCCG TGCTACGCGC ACCGATGTTT ATTCCCGGTA TGGTAGCCGC ATTTTTGTTC
GTCAATATCA TCGCCTACCA CGGTGTGATT AACGAGTTGT TAATGGCACT GGGGGTTATC
AACGAACCGC TGCGAATGCA AAACGATGAC TTCGGTTGGG GCGTTGTTAT TCTGCAAGTC
TGGAAGAACC TGCCGTTTGC CCTGATTCTG GTGGGCGGTG CGGTCAATGC CATCCGCAAC
GATGTGCTGG ACGCCGCCAG CAACCTCGGG GCCAACCGCC TACGGAGCTT TACCGGTATC
GTGGTACCAC TCACATTACC TGCCGTGCAG GTGACGCTCA TTCTGGTCTT TATCGGTGCA
CTGGGCGATT TCGCCTTTTT CTCGGTCGCC GGGCCGCGCA ACACATATTC TCTGGCACGC
CTGATGCAAG CCACCGCTAT GGAATACGGT GAGTGGAATA ACGCTGCCGT GATCGCCGTC
ATTATTATGA CCACCGCGGC TATTTTTACG CTGCTGATTG CCACTTTAAT CACACCGTTC
GCCACCCGTA AAGGAGACGT CAAATGA
 
Protein sequence
MKSWRNDLLA WSLMLSGLGT ILLLMGSTFY VVVVQSLGYF NLEGESHFSL EFWRNMLQDE 
VLHSALFYSV KVSVLGAFGS VIFAYPLALW LRKPLIAKEG IIAVLRAPMF IPGMVAAFLF
VNIIAYHGVI NELLMALGVI NEPLRMQNDD FGWGVVILQV WKNLPFALIL VGGAVNAIRN
DVLDAASNLG ANRLRSFTGI VVPLTLPAVQ VTLILVFIGA LGDFAFFSVA GPRNTYSLAR
LMQATAMEYG EWNNAAVIAV IIMTTAAIFT LLIATLITPF ATRKGDVK