Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2282 |
Symbol | |
ID | 5800752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2391137 |
End bp | 2391694 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641340175 |
Product | virulence factor |
Protein accession | YP_001606720 |
Protein GI | 162421483 |
COG category | [S] Function unknown |
COG ID | [COG4458] Uncharacterized protein conserved in bacteria, putative virulence factor |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCAT TAACCCCGCA GTTACTTAAT GGCCAACAAC TTCATGACCA GTTACAGCAG GTAACACAAG GTATCGACCA AGCGATTGAT TGGGTTAAGA GTACCCGCCA ACATGCTGTT CGTTTGGATA GAGAAGCCGA ACACTTAACC ATTAAGTTAC GCCGTATGCG TAATAAAGCG CACCCTCTAT CTGAGACCGC GCTAACCGCG ATGACTATTG GTTTTGTGGG GCAATCACAG GCGGGGAAAA AACACCTTAT CTCGGCACTG GCGGCCAATG AACATGGCCG ATTGGAAAAC ACGCTCGGGG GGAAAAAACT CGACTTTTGG CAACAAATTA GGCCGGAATA TCAAACAACG GGCTTGGTTA CTCGCTTTAG CTATCAGACA GAAGGTCATC AAACGCACGG TCATGAAAGC AGAGCAACAA ATGAAGCCTA TCCGGTTCAG CTCACCTTAC TCAGCGAAGT AGATATCGCC AAAATCATCT CCCGTGCTTT CTTGCTGGAT TGCCCTCAGG AAAATCCAGC TTATTGTGCC CAGAAAACCC CCAGCTAG
|
Protein sequence | MKSLTPQLLN GQQLHDQLQQ VTQGIDQAID WVKSTRQHAV RLDREAEHLT IKLRRMRNKA HPLSETALTA MTIGFVGQSQ AGKKHLISAL AANEHGRLEN TLGGKKLDFW QQIRPEYQTT GLVTRFSYQT EGHQTHGHES RATNEAYPVQ LTLLSEVDIA KIISRAFLLD CPQENPAYCA QKTPS
|
| |