Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1843 |
Symbol | rlpB |
ID | 5800314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1912040 |
End bp | 1912663 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641339775 |
Product | LPS-assembly lipoprotein RlpB |
Protein accession | YP_001606330 |
Protein GI | 162421352 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGACATC GTATTCTGAC GTTGTTGCTG GGGTTGGCGG TGCTGGTCAC CGCTGGCTGC GGTTTTAATC TGCGGGGCAC CACTCAGGTG CCAACTGAGT TGCAAAAATT ATTGCTGGAG AGCAGCGATC CCTATGGCCC GTTAGCCAGG TCTATACGTC AACAACTACG TTTAAATAAC GTGACTATTG TTGATGACGC CATGCGTAAA GATATACCGA CGCTGCGGAT CATCGGCTCA TCCGAAAGCC AAGAGACAGT GTCTATCTTC CGTAACGGTG TCGCGGCCGA GAATCAGTTA GTGCTACATG TACAGGCGCA GGTGTTGATT CCGGGCCATG ATATTTACCC ATTGCAGGTC AATGTGTTCC GCACATTCTT TGATAACCCG TTAACGGCGT TAGCCAAAGA GGCTGAAGCC GAGGTGCTTC GTCAAGAAAT GCGTGAGCAA GCCGCCCAGC AGTTAGTGCG TCAGTTACTG ACGGTACATG CGGCAGAAGT TAAAAACACG CAGAAAAATG GTGATAAACC GGTGAGTGAT GCCAACGCGG CTCAGGGCTC AACCCCGACA GCCGTCAATG AAACCACTCT CGGCGAACCT GCCGTCAGTA CCTCAGCCAA ATGA
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Protein sequence | MRHRILTLLL GLAVLVTAGC GFNLRGTTQV PTELQKLLLE SSDPYGPLAR SIRQQLRLNN VTIVDDAMRK DIPTLRIIGS SESQETVSIF RNGVAAENQL VLHVQAQVLI PGHDIYPLQV NVFRTFFDNP LTALAKEAEA EVLRQEMREQ AAQQLVRQLL TVHAAEVKNT QKNGDKPVSD ANAAQGSTPT AVNETTLGEP AVSTSAK
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