Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1518 |
Symbol | rpiA1 |
ID | 5799986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1568400 |
End bp | 1569110 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641339467 |
Product | ribose 5-phosphate isomerase A |
Protein accession | YP_001606027 |
Protein GI | 162419345 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.123747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC AACAAAATGA CGCCAAGAGG GCTGCCGCCC GTCGGGTGAT TCAGGATTTC GTGTTCGATG GCATGACGTT GGGGCTGGGT TCCGGGACCA CCTCGCATTT CTTTGTGCGC GAACTGGGCC AGCATGTTGC CAAGGGCTTG CAGTTAACCT GCACCACAAC TTCTCGTGCG ACGAGCGAGG TGGCGCGTGA CGTGGGCATT GAGCTCTCGG ATCCGAATGA GATGAATGAG ATTGATCTGA CCATCGACGG CCCAGATGAG ATTGACCGGC GGTTCAATAT GATCAAGGGC GGTGGAGCCT GCCTTCTGTG GGAGAAAATT ATCGCCCATG CCTCGAAGCG GATGATTTGT ATTTGTGATG AGACAAAAAT CGTCAATTGC TTGGGGCAAT TTCCGCTGCC AGTCGAAATC GTCCCCTTTG CCTGGAAACA GACCGAACGC AGGGTCGAGC GGGTACTCGC GGAACAGGGT CTCCATCATG TGCCGATTAT TCGGCGTATG GGGGGCGGGC ACCCGGTGAT CACTGACAGT GGAAACTTTA TTCTGGATTG CCATTGCGGG GCGATTATCA CGGCCCCTGA ACCGCTGGAA ATAGAGCTTA ATCGCATTCC GGGGGGGGTT GAAAACGGTC TTTTCACCCG TGAGGCTACC GGTATGGTGG TGGGCTATTT TGACGGTTCC TCCTACGTTC AACTGCGATA A
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Protein sequence | MSNQQNDAKR AAARRVIQDF VFDGMTLGLG SGTTSHFFVR ELGQHVAKGL QLTCTTTSRA TSEVARDVGI ELSDPNEMNE IDLTIDGPDE IDRRFNMIKG GGACLLWEKI IAHASKRMIC ICDETKIVNC LGQFPLPVEI VPFAWKQTER RVERVLAEQG LHHVPIIRRM GGGHPVITDS GNFILDCHCG AIITAPEPLE IELNRIPGGV ENGLFTREAT GMVVGYFDGS SYVQLR
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