Gene YpAngola_A1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1496 
Symbol 
ID5799964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1546549 
End bp1547649 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content48% 
IMG OID641339448 
ProductABC transporter permease 
Protein accessionYP_001606008 
Protein GI162419267 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCAT ATCTATTACG GCGACTATTC CTTGTTATTC CTACGCTGTG GGCCATTATT 
ACTATCAATT TCTTTATTGT GCAGATTGCA CCTGGCGGGC CAGTTGATCA GGCTATCGCC
AATATTGAAT TGGGTCACAC CACTGGATTT ACTGCCGGTA GCGGTGATGG CGGTTTAGGA
GGGGCTAAAG CCGGTCTGAA TGCAGCACAG GTCGGTGACA GTAATTATCG CGGTTCACGC
GGATTAGACC CGGAAGTTAT TGCTGAAATA AAACAGCGCT TTGGTTTTGA TAAGCCCCTA
CATCAACGCT ATTTCGATAT GCTATGGCGC TATGTCCGTT TTGATTTTGG CGACAGTTTG
TTCCGTGGCG AATCGGTGAT GTCACTGATA AAACAAAGCC TGCCGGTGTC AATCTCGCTT
GGGCTATGGA GTACGCTGAT TATTTATCTG GTTTCCATAC CTCTGGGGAT AAAAAAAGCG
GTGCGCAATG GCACCGCCTT CGATACCTGG AGCAGCACCT TAATTATCAT CGGTTATGCA
ATCCCCTCCT TCCTATTCGC TATTTTACTG GTAGTGCTGT TTTCCGGTGG GAGCTATTTC
GACCTATTCC CACTCCGCGG TCTGGTTTCC AGTAACTGGG ACACCCTACC GTGGTACAGC
AAAATCACAG ACTATTTGTG GCATATTACC CTGCCCGTGC TGGCCACGGT GATTGGTGGT
TTCGCGACAC TGACGATGCT AACGAAAAAC TCATTCCTTG ATGAAATACG TAAGCAATAT
GTCGTTACGG CCCGCGCCAA GGGACTACCA GAGGAAAAAA TTCTCTATCG CCATGTCTTT
CGTAACGCCA TGCTGTTAGT CATCGCCGGA TTCCCCGCCA CCTTTGTCAG TATGTTTTTC
ACGGGTTCAC TCTTGATTGA AGTGATGTTC TCACTCAATG GCTTAGGCCT GCTGGGATAC
GACGCCACCA TACAGCGAGA TTACCCGGTA ATGTTTGGCA CGCTCTATAT TTTCACACTC
ATTGGTTTAC TGCTGAATAT CGTCAGTGAC ATTACCTATA CCCTGGTAGA CCCACGTATT
GATTTTGAGG GCCGCCAATA A
 
Protein sequence
MGAYLLRRLF LVIPTLWAII TINFFIVQIA PGGPVDQAIA NIELGHTTGF TAGSGDGGLG 
GAKAGLNAAQ VGDSNYRGSR GLDPEVIAEI KQRFGFDKPL HQRYFDMLWR YVRFDFGDSL
FRGESVMSLI KQSLPVSISL GLWSTLIIYL VSIPLGIKKA VRNGTAFDTW SSTLIIIGYA
IPSFLFAILL VVLFSGGSYF DLFPLRGLVS SNWDTLPWYS KITDYLWHIT LPVLATVIGG
FATLTMLTKN SFLDEIRKQY VVTARAKGLP EEKILYRHVF RNAMLLVIAG FPATFVSMFF
TGSLLIEVMF SLNGLGLLGY DATIQRDYPV MFGTLYIFTL IGLLLNIVSD ITYTLVDPRI
DFEGRQ