Gene YpAngola_A1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1495 
Symbol 
ID5799963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1545521 
End bp1546549 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content50% 
IMG OID641339447 
ProductABC transporter permease 
Protein accessionYP_001606007 
Protein GI162420571 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.733887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA GACTAAGTGC AATTAATCAG GCCCGTTGGG CGCGTTTTCG TCAGAATCGC 
CGTGGTTACT GGTCACTGTG GATTTTCCTA ACACTGTTTG TCATTAGCTT ATTTGCCGAA
TTGATTGCCA ACGATAAACC ATTGCTGGTG AGCTATCAGG GCAAGTTTTA TATGCCTTTT
ATGGTCAATT ACAGTGAGTC AACCTTTGGC GGTGTTTTAA CCACCGCGGC AGATTATCAA
GACCCGTATG TGATTGGGCG TATAAATGAC AGTGGCTGGG CTATCTGGGC ACCTATTCGT
TTTAGTAATA ACACCATTAA TTTCGCCACG GACGTGCCCT TCCCTTCTCC GCCAAGCCGT
ACCAACTTGC TGGGTACTGA TAGTACCGGC GGAGATGTCT TGGCCAAAGT GATCTATGGC
TTTCGTATCT CGCTGTTGTT CGGGCTGACA TTAACCCTGT TTTCCAGTGT GATTGGGATC
TGCGCCGGTG CGGTACAAGG CTATTACGGG GGCAGGGTTG ATCTCTGGGG CCAACGCTTT
ATTGAGGTAT GGTCTGGTAT GCCAACCCTG TTTTTAGTGA TTTTACTGTC GAGCATTGTG
CAGCCCAATT TCTGGTGGCT GCTTGCTATC ACCGTTATTT TTGGCTGGAT GGGGTTGGTG
GGTGTCGTGC GCGCTGAGTT TCTCCGGACC CGCAATTATG ATTATATCCG TGCCGCACGG
GCGATGGGGG TACGTGATCG AACCATCATG ACTCGCCATA TGTTGCCTAA TGCCATGGTG
GCCACACTGA CCTTCTTGCC GTTTATTCTG TGTGGCTCCA TTACCACCCT CACCTCACTG
GATTTCCTCG GTTTTGGTTT GCCGATAGGT TCACCATCAC TGGGTGGGCT GCTGTTAGAG
GGGAAAAATA ACCTACAGGC CCCTTGGCTG GGGATCACCG CATTTCTGGT GCTGGCGGTG
CTATTGTCCC TATTGATTTT TATCGGCGAA GCTGTCCGTG ACGCCTTTGA CCCAAGTAAG
GTGTACTGA
 
Protein sequence
MMMRLSAINQ ARWARFRQNR RGYWSLWIFL TLFVISLFAE LIANDKPLLV SYQGKFYMPF 
MVNYSESTFG GVLTTAADYQ DPYVIGRIND SGWAIWAPIR FSNNTINFAT DVPFPSPPSR
TNLLGTDSTG GDVLAKVIYG FRISLLFGLT LTLFSSVIGI CAGAVQGYYG GRVDLWGQRF
IEVWSGMPTL FLVILLSSIV QPNFWWLLAI TVIFGWMGLV GVVRAEFLRT RNYDYIRAAR
AMGVRDRTIM TRHMLPNAMV ATLTFLPFIL CGSITTLTSL DFLGFGLPIG SPSLGGLLLE
GKNNLQAPWL GITAFLVLAV LLSLLIFIGE AVRDAFDPSK VY