| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1380 |
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| Symbol | sdhC |
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| ID | 5799847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 1437540 |
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| End bp | 1437929 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641339339 |
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| Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
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| Protein accession | YP_001605906 |
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| Protein GI | 162418632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00254189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.334733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGCAAAA CCGTGAAAAA ACAAAGACCT GTCAATTTGG ATCTGCAAAC GATTCGATTT
CCTGTTACTG CGATAGCGTC CATCTTACAC CGAGTCTCTG GCGTAATTAC CTTCGTGGCT
GTCGGTATCC TCCTCTGGCT GTTGGGTTTG TCTGTTTCCT CACAAGAAGG ATTCATGCAG
GCAGCAACCA TCATGAATAG TTTTTTTGTT AAATTCATCT TTTGGGGAAT ACTCACTGCG
CTGGCTTATC ACATTTGCGG TGGCATCCGT CACTTGTTAA TGGATTTTGG CTATCTCGAA
GAGAATTTAG CCGTGGGTAC CCGTTCTGCT CAAGTGGCAA TGGGATTAAC CCTCGTGTTG
TCAGTTTTGG CTGGAGTCCT CGTATGGTAA
|
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| Protein sequence | MGKTVKKQRP VNLDLQTIRF PVTAIASILH RVSGVITFVA VGILLWLLGL SVSSQEGFMQ
AATIMNSFFV KFIFWGILTA LAYHICGGIR HLLMDFGYLE ENLAVGTRSA QVAMGLTLVL
SVLAGVLVW
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