Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1338 |
Symbol | |
ID | 5799804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 1400107 |
End bp | 1401183 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641339299 |
Product | hydrophobic amino acid ABC transporter permease |
Protein accession | YP_001605867 |
Protein GI | 162418934 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.547268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC CACTGACGGT AACCTTAACG CAAAAAGCAC CGCTTACCAG CCTGTTATTA GGTATGGTCA CGCTGATCGC ACTGATTGTT CTGCCTTTTT TGGCGCTGTT ACCGGCGGAT CATCCGTTGG CGATATCAAC CTATACCCTG ACGCTGATCG GCAAAATATT ATGTTATGCC GTGGTGGCTA TCGCCCTTGA TCTGGTTTGG GGATATGCCG GATTGCTATC ACTTGGGCAC GGATTATTTT TTGCTCTGGG CGGTTATGCC ATGGGGATGT ATCTGATGCG TCAGGCTGCG GGAGACGGTT TACCTGCGTT TATGTCTTTT TTATCGTGGT CTGAGCTTCC TTGGTTTTGG AGCGGCAGTC AGTACTTTGT TTGGGCATTG TGCCTAATTG TACTGGTTCC CGGGTTGCTG GCTTTTCTGT TCGGTTATTT TGCTTTTCGC TCCAAAATCA AAGGCGTCTA TTTTTCTATT ATGACGCAGG CGCTGACCTA CGCGGGTATG TTGTTATTTT TCCGCAATGA AACGGGTTTT GGTGGCAATA ACGGCTTTAC TGGCTTCACT ACGATGCTGG GGTTCCCTGT CTCGGCCACC TCTACCCGTA TCGCATTATT TCTGGCAACC CTCGCACTGC TCATTGCCAG TCTGGCGCTG GGGCTGGCAT TAGCGCGCAC TAAATTTGGT CGGGTATTGA CGGCGGTACG CGATGCCGAA AACCGCCTGA TGTTTTGTGG TTATGATCCT AAAGGTTTCA AGCTGTTTGT CTGGACTCTA TCGGCGGTAC TTTGTGCTCT GGCAGGCGCG TTGTATGTAC CGCAGGTGGG CATTATCAAT CCCAGTGAAA TGTCACCGAC CAACTCAATT GAAGCGGCAA TTTGGGTGGC ACTAGGGGGC CGAGGAACTC TGATAGGGCC GGTATTGGGG GCCGGAATTG TCAACGGTGC CAAAAGTTGG TTCACCATGG CGATGCCGGA ATACTGGCAA TTTTTTCTTG GCCTGATATT CATTCTGGTC ACGTTATTTT TGCCGAAGGG GGTTATCGGG CTATTGCGCA GGGGGAAAGA CCAATGA
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Protein sequence | MNQPLTVTLT QKAPLTSLLL GMVTLIALIV LPFLALLPAD HPLAISTYTL TLIGKILCYA VVAIALDLVW GYAGLLSLGH GLFFALGGYA MGMYLMRQAA GDGLPAFMSF LSWSELPWFW SGSQYFVWAL CLIVLVPGLL AFLFGYFAFR SKIKGVYFSI MTQALTYAGM LLFFRNETGF GGNNGFTGFT TMLGFPVSAT STRIALFLAT LALLIASLAL GLALARTKFG RVLTAVRDAE NRLMFCGYDP KGFKLFVWTL SAVLCALAGA LYVPQVGIIN PSEMSPTNSI EAAIWVALGG RGTLIGPVLG AGIVNGAKSW FTMAMPEYWQ FFLGLIFILV TLFLPKGVIG LLRRGKDQ
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