Gene YpAngola_A1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1192 
Symbol 
ID5799657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1237209 
End bp1238078 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID641339164 
Producthydrolase, carbon-nitrogen family protein 
Protein accessionYP_001605734 
Protein GI162421179 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0011583 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAATG CCAATGTTGC ATTATTGCAG TTGTGCAGCG GTGAAAATAC CCGTGACAAT 
CTGGCTCAAA TTGAGCAGCA GATCAAACAG TTAAATGCAG GTATCAAACT GGTTATGACG
CCTGAAAATG CGTTGTTATT TGCTAATGCT GCCTCTTATC GTCACCATGC GGAACACCAT
AATGACGGTC CATTACAGCA AGAAGTGCGT GAAATGGCAC GGCGCTACGG GGTTTGGATA
CAGGTTGGCT CCATGCCTAT GGTGAGCCGT GAGTCACCGG ACCTGATCAC CAGCAGTAGC
TTGTTATTTG ATGATCAAGG CGAACTCAAA GCCCGTTACG ATAAAATTCA CATGTTTGAT
GTCGATATCA ATGACATCCA TGGCCATTAC CGTGAGTCTG ATACTTATCA GCCGGGGCAG
CAGTTGACGG TGGTTGATAC CCCGGTTGGC CGCTTGGGCA TGACCATTTG CTATGACTTG
CGTTTCCCTG GCTTGTTTCA GGCTTTGCGA GCGCAGGGGG CTGAAATCAT TTCTGTTCCG
GCAGCCTTTA CCAAAATGAC GGGTGAGGCG CATTGGGAAA CATTGCTCCG TGCACGGGCT
ATCGAAAACC AGTGCGTGAT ATTGGCTGCT GCACAGGTGG GGCGTCACGG TGCTACCCGC
CGGACGTGGG GCCATACCAT GGCAGTCGAT GCCTGGGGTA AAATTATTGG GCATAACCCA
GATGCGGTGG CGGCCCTAAA AGTAAGAATT GAAACCGCAG GTTTGAAGAC GATTCGCAAT
CAAATGCCGG TCATGCAGCA CAATCGCTTT CAGGCGACGC TGGAGCCGAC ATTGAATAAA
CCATTATTGA ATAAACCACC ATCTAATTAA
 
Protein sequence
MKNANVALLQ LCSGENTRDN LAQIEQQIKQ LNAGIKLVMT PENALLFANA ASYRHHAEHH 
NDGPLQQEVR EMARRYGVWI QVGSMPMVSR ESPDLITSSS LLFDDQGELK ARYDKIHMFD
VDINDIHGHY RESDTYQPGQ QLTVVDTPVG RLGMTICYDL RFPGLFQALR AQGAEIISVP
AAFTKMTGEA HWETLLRARA IENQCVILAA AQVGRHGATR RTWGHTMAVD AWGKIIGHNP
DAVAALKVRI ETAGLKTIRN QMPVMQHNRF QATLEPTLNK PLLNKPPSN