Gene YpAngola_A1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1088 
Symbol 
ID5799551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1120703 
End bp1121371 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID641339066 
Productputative tellurium resistance protein 
Protein accessionYP_001605638 
Protein GI162420405 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACTCA TCTTAAGAAC TACCTCTGAT ATGAGAAGGC TACCCGTTTA TTTGCTGATT 
GACACCTCTG GGTCAATGCG CGGTGAATCC ATCCATGCCG TCAATGTTGG CATTCAGGCG
ATGATGAGCG CACTGCGTCA AGACCCTTAC GCACTTGAAA GCGTTCATCT CTCTATCATT
ACTTACGATA ACCAAGCTCG GGAGTATATC CCCTTGACGG CACTGGAGAA TTTCCAGTTC
ACCGATATTA CTGTCCCCAG CGCGGGAGGC ACATTCACCG GTGCAGCACT TGAATGCCTG
ATCCATTGTG TTGATCGCGA TATCCAACGA TCTGATGGCG ATCAGAAAGG CGACTGGCGT
CCTCTGGTGT TTCTCATGAC TGACAGCACC CCTTCAGATG TCTACGCTTA CGGCGAGGCA
ATCAAAGAGG TTAAAAAGCG GGCGTTCGGC TCCATTATCG CCTGTGCTGT CGGCGCGAAG
GCTAAACATG AACACCTCAA GCAACTGACC TCTCAGGTCG TGGCGCTTGA AACGCTGGAT
TCAACCGCAT TTTCAGGTTT CTTCAAGTGG GTTTCGGCAA GCGTCGCCGC AGGAAGCTCA
AGTGCGGGTA TCAACACCGG GCAGGATAAC CTACCGCCAC CGCCCCCAGA AATTCAGTTG
GTACTGTAA
 
Protein sequence
MSLILRTTSD MRRLPVYLLI DTSGSMRGES IHAVNVGIQA MMSALRQDPY ALESVHLSII 
TYDNQAREYI PLTALENFQF TDITVPSAGG TFTGAALECL IHCVDRDIQR SDGDQKGDWR
PLVFLMTDST PSDVYAYGEA IKEVKKRAFG SIIACAVGAK AKHEHLKQLT SQVVALETLD
STAFSGFFKW VSASVAAGSS SAGINTGQDN LPPPPPEIQL VL