Gene YpAngola_A1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1058 
Symbol 
ID5799521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1080898 
End bp1082130 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content43% 
IMG OID641339045 
Productputative aspartate aminotransferase 
Protein accessionYP_001605617 
Protein GI162418545 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0685472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA TTAGAAGAAA AATGCGTCCA GAGTTCCAAG GCTTACAAGG TGGATTGTTT 
AGCAGTGTAA AAAAAGCGGA TGTTGGTACC GCTGTATTGG ATCTCATGGC CAATGGTGTT
GACATGTTGT GCTGGGCAGA TCCTTTTTTC CCCGACCCCG TTTTGCCGGA ACATATCTCT
CAAGCAGTGA TTAAATCGAT GGAAAATGGC AGTGCTAGCC ATTATACAAT GCCTATTGGT
AATCCAGAGT TAAAAGAAAA AATAGCGCTT AAATTACAAC GTTATAATAA CCTTACTGTT
GAGGCACAGC GAAATATTCT GATTACCCCC GGCTCCGATT CGGGTTTATT ATTCGCGATG
ATGCCTTTTA TTAATAATGA TGATGAAGTT CTGATTCATT CCCCTTCGTA TCCCAGTAAT
TTCCTTAACG TCGAATTACT GGGAGGGAAA CCGATCAGCG TCGAGCTAAA AGCGGAAAAT
AATTTCCAGA TAGATATTAA AGATTTTGAA AATAAAATCA CCGAAAAAAC CAAGATGGTG
ATCCTCACCA ACCCTAATAA TCCTACCGGA ACAGTGCTTC GCCGGGAAAG TTTACAGGCT
ATCGCCGATT TTATTATCGC ACATGATCTT ATATTGGTTG TCGACCAAGC ATTTGAAGAC
GCTATTTTTG ATGAAATCGA ATTTATTTCT ATCGCGTCAT TACCTGGCAT GTGGGAACGG
ACGGTCAGTG TATTCTCCTT CTCTAAAGGC ATGGGGTTAA GTGGGTTCCG CGTTGGATAT
CTGGTGGCCG ATGCCCAAAT TGTTGACGTT CTCTTTGGCT GTACCGTCAA TGTCGTGGGT
GCGACAAATA CCTCTTCTCA GGCGGGCATG ATCGCTGCGT TGGATGAACC TTCTTTTATG
GGGGAATATA CGCAAATCTT TGAGCGCCGC CGTAAGGTAG TGTTTGAGAT GATGAATGCG
ATTCCTGGCG TATGCATGGT GATGCCTGAA AGTGGGTTCC TCTCATGGAT AGATATTTCT
AAACTGGGTA CCTCTACCTT TATCTGTGAC TATTTATTGC AACATGCTCA TGTCATGGTT
AATTCAGGTG TTCCTTATGG TCAAGGTGGT GAGGGGTATA TTCGTCTGGT ACATGGTTGT
TATAAAGATG ATGAAAAACT CTATGCAGTT TTGACTCGAA TCCAACAGGC ATTAATGCAG
TTAGCGAAGG AAAAGGGGAT CTGCCATGGA TAA
 
Protein sequence
MNTIRRKMRP EFQGLQGGLF SSVKKADVGT AVLDLMANGV DMLCWADPFF PDPVLPEHIS 
QAVIKSMENG SASHYTMPIG NPELKEKIAL KLQRYNNLTV EAQRNILITP GSDSGLLFAM
MPFINNDDEV LIHSPSYPSN FLNVELLGGK PISVELKAEN NFQIDIKDFE NKITEKTKMV
ILTNPNNPTG TVLRRESLQA IADFIIAHDL ILVVDQAFED AIFDEIEFIS IASLPGMWER
TVSVFSFSKG MGLSGFRVGY LVADAQIVDV LFGCTVNVVG ATNTSSQAGM IAALDEPSFM
GEYTQIFERR RKVVFEMMNA IPGVCMVMPE SGFLSWIDIS KLGTSTFICD YLLQHAHVMV
NSGVPYGQGG EGYIRLVHGC YKDDEKLYAV LTRIQQALMQ LAKEKGICHG