Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A1024 |
Symbol | speD |
ID | 5799487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 1046402 |
End bp | 1047196 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641339013 |
Product | S-adenosylmethionine decarboxylase |
Protein accession | YP_001605585 |
Protein GI | 162420735 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1586] S-adenosylmethionine decarboxylase |
TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAAGC TTAAACTGCA CGGCTTCAAC AACCTGACCA AAAGCCTGAG TTTTTGTATT TACGATATTT GTTATGCCAA GACCGCAGAC GACCGCGATG GCTATATCGC CTACATTGAC GAACAGTACA ATGCCAATCG CTTGACCGAG ATCTTGAGCG AAACCTGCTC GATCATCGGT GCCAATATTT TAAATATTGC TCGTCAGGAT TACGATCCAC AAGGTGCCAG CGTCACCATT TTGGTCAGTG AAGAGCCCGT TGATCCGCGC GATGTTGATA CCTCTGAACA TCCCGGTCCA TTGCCAAGCG CCGTGGTGGC CCACCTGGAT AAGAGCCATA TCTGTGTGCA TACTTATCCA GAAAGCCACC CTGAAGCGGG GTTATGTACT TTCCGTGCCG ATATCGAGGT CTCTACCTGT GGGGTGATTT CTCCGCTGAA GGCCCTGAAT TACCTGATCC ATCAGCTCGA ATCCGATATC GTGACCATGG ATTACCGGGT ACGGGGTTTC ACCCGAGATA TCAATGGGGT AAAACATTTT ATCGATCACA AAATCAATTC CATTCAAAAT TTTATGTCCG ATGACATGAA GTCGCTTTAT CACATGATGG ATGTGAATGT TTATCAGGAA AATATCTTCC ATACCAAGAT GATGCTGAAA GATTTCGATT TAAAGCATTA TCTGTTTAAC GCCAAGCCGG AAGAGCTAAG CGCAGAAGAA AAGGAACAGA TTACCCGCCT GTTATACAAA GAAATGCAGG AAATCTACTA TGGCCGCAAT GTGCCGGAAG TGTGA
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Protein sequence | MSKLKLHGFN NLTKSLSFCI YDICYAKTAD DRDGYIAYID EQYNANRLTE ILSETCSIIG ANILNIARQD YDPQGASVTI LVSEEPVDPR DVDTSEHPGP LPSAVVAHLD KSHICVHTYP ESHPEAGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTMDYRVRGF TRDINGVKHF IDHKINSIQN FMSDDMKSLY HMMDVNVYQE NIFHTKMMLK DFDLKHYLFN AKPEELSAEE KEQITRLLYK EMQEIYYGRN VPEV
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