Gene YpAngola_A1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1024 
SymbolspeD 
ID5799487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp1046402 
End bp1047196 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content46% 
IMG OID641339013 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_001605585 
Protein GI162420735 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAAGC TTAAACTGCA CGGCTTCAAC AACCTGACCA AAAGCCTGAG TTTTTGTATT 
TACGATATTT GTTATGCCAA GACCGCAGAC GACCGCGATG GCTATATCGC CTACATTGAC
GAACAGTACA ATGCCAATCG CTTGACCGAG ATCTTGAGCG AAACCTGCTC GATCATCGGT
GCCAATATTT TAAATATTGC TCGTCAGGAT TACGATCCAC AAGGTGCCAG CGTCACCATT
TTGGTCAGTG AAGAGCCCGT TGATCCGCGC GATGTTGATA CCTCTGAACA TCCCGGTCCA
TTGCCAAGCG CCGTGGTGGC CCACCTGGAT AAGAGCCATA TCTGTGTGCA TACTTATCCA
GAAAGCCACC CTGAAGCGGG GTTATGTACT TTCCGTGCCG ATATCGAGGT CTCTACCTGT
GGGGTGATTT CTCCGCTGAA GGCCCTGAAT TACCTGATCC ATCAGCTCGA ATCCGATATC
GTGACCATGG ATTACCGGGT ACGGGGTTTC ACCCGAGATA TCAATGGGGT AAAACATTTT
ATCGATCACA AAATCAATTC CATTCAAAAT TTTATGTCCG ATGACATGAA GTCGCTTTAT
CACATGATGG ATGTGAATGT TTATCAGGAA AATATCTTCC ATACCAAGAT GATGCTGAAA
GATTTCGATT TAAAGCATTA TCTGTTTAAC GCCAAGCCGG AAGAGCTAAG CGCAGAAGAA
AAGGAACAGA TTACCCGCCT GTTATACAAA GAAATGCAGG AAATCTACTA TGGCCGCAAT
GTGCCGGAAG TGTGA
 
Protein sequence
MSKLKLHGFN NLTKSLSFCI YDICYAKTAD DRDGYIAYID EQYNANRLTE ILSETCSIIG 
ANILNIARQD YDPQGASVTI LVSEEPVDPR DVDTSEHPGP LPSAVVAHLD KSHICVHTYP
ESHPEAGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTMDYRVRGF TRDINGVKHF
IDHKINSIQN FMSDDMKSLY HMMDVNVYQE NIFHTKMMLK DFDLKHYLFN AKPEELSAEE
KEQITRLLYK EMQEIYYGRN VPEV