| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0643 |
|---|
| Symbol | |
|---|
| ID | 5799105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 645805 |
|---|
| End bp | 646788 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641338644 |
|---|
| Product | LysR family substrate-binding transcriptional regulator |
|---|
| Protein accession | YP_001605225 |
|---|
| Protein GI | 162418594 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0399655 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATAG ATGAAAACAC TTTTGCATTT AGCGCAAAAA TAAATAATCA TGCCATTTAT
AAGCATTTAG AGAATTTTAT CAAAATTGTT GAATGCAACA GCCTATCCAT TGCTGCACAT
AAATTAAATA TAACACCGTC TTCCACTAGC CGTAGTCTGG CTCAATTAGA GGAGAAGCTC
GGTGTGGTAC TATTAAAAAG AACCACTCGC AGCATCGTTT TAACCGATGC TGGCGATTAC
TTGTTTCATC AGGCGCGCCA ACTCCTTTTG GATCTGGATG AAACACTGGT TAATACGCAT
AGTTTTTATA ACCACCCACA GGGGCAGCTC AAGATTACCT GCTCTATCGC TTTTGGTGTC
TGTCATTTAA TGCATCTATT TAGTCAATAT AAAGAAACTA ACAGCGATGT CTGTTTATCG
GTGGATTTAA ATGATCAGTT AGTGAATTTA AATGAAGAAC ATTTTGATAT TGCCTTGCGT
ATCACCTCAA TTCCCCCGCC TAATTTTGCT ATACGAAGAA TTTGTACCAT TAACTGGGTT
TATTGTGGCA GTAAAGAATA TCTAATGAAA CGCGGTGTTC CAGCCACTAT CGAAGATCTT
GAGCAACATG ATTGCCTGGT AAACCCTAAC GTTTCCGATG CCTGGTTATA TAAAAGTACA
GAGGGTGAGA GCGTCCCCTT GAAAATAAAA AATACCGTGC AGGCCAACAG CAGCCTGGGG
TTATTACATG CTGCGCTGCA TCATCAGGGC ATTGTCTGTC TACCTACTTA TATGCTGGGC
GACTATATAA CCTCAGGTAA ATTAGTGCCT ATTTTACTGG ATTATAATGC TAAAGATAAA
GAATATGGCC TATATGCTTT ATATTACCCT AGCAAATATA ACGATCCAAA AATAAGAAGT
TTTATTGATT TTATGTTGGA TGAACTGTCA ATGGACGTGC CATGGGATAA ATGGAGAGCA
GATTATCAAA TCTCATTATC CTGA
|
|---|
| Protein sequence | MSIDENTFAF SAKINNHAIY KHLENFIKIV ECNSLSIAAH KLNITPSSTS RSLAQLEEKL
GVVLLKRTTR SIVLTDAGDY LFHQARQLLL DLDETLVNTH SFYNHPQGQL KITCSIAFGV
CHLMHLFSQY KETNSDVCLS VDLNDQLVNL NEEHFDIALR ITSIPPPNFA IRRICTINWV
YCGSKEYLMK RGVPATIEDL EQHDCLVNPN VSDAWLYKST EGESVPLKIK NTVQANSSLG
LLHAALHHQG IVCLPTYMLG DYITSGKLVP ILLDYNAKDK EYGLYALYYP SKYNDPKIRS
FIDFMLDELS MDVPWDKWRA DYQISLS
|
|---|
| |